| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1199 |
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| Symbol | |
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| ID | 5136706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1263369 |
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| End bp | 1264802 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532657 |
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| Product | putative multidrug transporter |
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| Protein accession | YP_001217145 |
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| Protein GI | 147674445 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.467724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAGC CTGTAGATAG AAAAACCTTT TTGGGCATCT TTTTTACGGT TTTTTTGCCA
ATGTTTTTGG CGGCCGTTGA TCAAACCTTG CTGGCTACCG CGACGCCTGC GATTGTGCGC
GATCTCGGCA ACTTGCAACT TTCTTCGTGG ATTGCGATTG GTTACATGCT GGCAAGTGCA
GCCAGTGTTC CGGTTTACGG CTGGTTAGGG GATCAGTATG GACGTAAACC GATGTTAATG
ATTGCGCTGA GTATTTTTGC CTTAGGTTCC GTCATTTGTG CTTTTGCAAT GAATATGCCG
TGGTTGGTGG CTGGTCGGAT TGTACAAGGA CTGGGTAGCG GCGGCTTAAT GAGCTTATCA
CAAGCCTTGA TCGGGGAATT AGTACCGCCC CGCGAGCGTG CCCGTTTTCA GGGCTATTTT
TCCTCACTTT TTGCGGTGGC CAGTATTGGG GGGCCAGTGT TAGGTGGTGT ATTGGTAACC
TACCTTTCTT GGCAATGGCT GTTTTGGTTT AACCTGCCGC TTGTGGGCAT CGCTTTGTAT
CGACTGGCAC GATTTCAATT TGTGCAAAGT TCGCGTAAGT CTGAGGCTTC AATTGATGTG
GCTGGGCTTA TCCTGTTTCC CAGTATGATG ACTCTCATCA TCTATTGGCT TTCGGCTGGC
GGGCACTATT TTCCGTGGTT CTCGGTCACC AGCATAAGCC TAGTGAGTGC ATTTGTTTTA
ACGAGCTTGC TGTTTATCGC CCAGCAAAAG CGAGTCACGG CTTCCTTTTT ACCACTCCGT
TTATTGGCGC GTCGTGAAAT ACATATTCCG TTGCTCTCCA CGTTCATTTT CGCGGCTTGT
TTGTTTGCGC TGATCTTCTT TTTACCGATT TTTTTACAGC TCGGCTTACG AGTTAACGCA
GCACAATCGG GACTACTGCT TATCCCCCTG TCATGCGGCA TTATTGGTGG CGCCTATACG
ACCGGTAAAG TGATTGCTAA AACAGGAGTG CCCAAATTTT TGCCTGTGTT TGGTATGAGT
TTAAGTAGCT GCGCCTTTGC TGTGTTGGCG ATGTTTTCAC TCTCTGCGCC CGTGGTGAGT
GCGATTGCTG CCTTATGTGG TTTAGGCTTA GGCACTGTGA TGCCCTCAAC CCAAGTTTTA
GTTCAAACAT TGGCAGGCAA AGCCAATTTA GGGCGGATCA CCGCGATGGC TTCACTGAGC
CGCTCGTTAG GGGCATCGGT CGGCACCGCT TTCTTTGGTA CATTGATTTA CTCCTTACTT
CCCGGTTTAT CGCCAAACAG TGGTTTGCAG GCGATTGCCG CATTGCCACA AAGTGAAATT
TTGCATGCTT TTCAAATTGG CTTTGCGGTT GCGGCGCTGC TTGCGTTGCT AGGGGCATTG
AATGCGTTGC GCGCTCCGAA AATTCAGTTG GATGATTACG CCTTTGACTC TTAA
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| Protein sequence | MSQPVDRKTF LGIFFTVFLP MFLAAVDQTL LATATPAIVR DLGNLQLSSW IAIGYMLASA
ASVPVYGWLG DQYGRKPMLM IALSIFALGS VICAFAMNMP WLVAGRIVQG LGSGGLMSLS
QALIGELVPP RERARFQGYF SSLFAVASIG GPVLGGVLVT YLSWQWLFWF NLPLVGIALY
RLARFQFVQS SRKSEASIDV AGLILFPSMM TLIIYWLSAG GHYFPWFSVT SISLVSAFVL
TSLLFIAQQK RVTASFLPLR LLARREIHIP LLSTFIFAAC LFALIFFLPI FLQLGLRVNA
AQSGLLLIPL SCGIIGGAYT TGKVIAKTGV PKFLPVFGMS LSSCAFAVLA MFSLSAPVVS
AIAALCGLGL GTVMPSTQVL VQTLAGKANL GRITAMASLS RSLGASVGTA FFGTLIYSLL
PGLSPNSGLQ AIAALPQSEI LHAFQIGFAV AALLALLGAL NALRAPKIQL DDYAFDS
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