Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1194 |
Symbol | |
ID | 5137071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1257330 |
End bp | 1258184 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640532652 |
Product | hypothetical protein |
Protein accession | YP_001217140 |
Protein GI | 147674015 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.603137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCACA TCCACCCCTA CCAAAATGAA TTGAGTGATA TTTTACGCAA ACAGCGCATT ACCCCGTTAT TCCAACCCAT TGTGCACCTT GCGAGCGAGC GTGCTATAGG GTACGAGTCG CTCAGTCGAG GCCCTCAACA AAGTCCTCTT CATACGGCGG GTTCTCTGTT TGAAGCGGCT GAACAGTGCC AGCGCTTACC CGAGTTAGAG AAAATTTGTG TACACAAGGC GGCGGCAGCT TGGTCAAGCT TCGGGATCGA TTCACAGCTT TTTATCAACC TGAGCCCAGA TATGTTGCTG CATTCACAAC AACACCAGTG GGAATTACCA CAATTGATGC AGCGTCACCG TCTATCCGCC AATCAGGTCG TGTTTGAAAT TTCTGAGCGC ACCCCTGCAT TGCAGTTGGA TGAGTTGAAA AACTCGGTTC AACATCTACA AGCACAAGGA TTTTCAATAG CGATTGATGA TATGGGCTCT GGGTATTCAG GATTAAAACT GTGGTCTGAA TTACAGCCGG ATTTTGTGAA AATTGATCGC TACTTTATCC ATAACATTGA CAGTAACCCA ATCAAACTGA AATTTGTGCG TAGTTTGGTA CAACTGGCAG AACAACTTGA TTGCCAATTA ATTGCAGAGG GAGTAGAAAC GCGCTCCGAA CTTTTGGCCA TAGCGGATTT AGGTATCGAG TTAGTCCAAG GGTATTTATT CGGTCGCCCT CAACTTACGC CTCAGCGAAT ATATCATTCG CAGAGTTTTT CCTCTGCCAC GGTCTTAAAC ATCGAGTCAG CTCGTACAGA AACGCCTCTT CAGTACCTAA TGTTTCAAGA TACTCCACGT ATGTCTGCGT TATAG
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Protein sequence | MNHIHPYQNE LSDILRKQRI TPLFQPIVHL ASERAIGYES LSRGPQQSPL HTAGSLFEAA EQCQRLPELE KICVHKAAAA WSSFGIDSQL FINLSPDMLL HSQQHQWELP QLMQRHRLSA NQVVFEISER TPALQLDELK NSVQHLQAQG FSIAIDDMGS GYSGLKLWSE LQPDFVKIDR YFIHNIDSNP IKLKFVRSLV QLAEQLDCQL IAEGVETRSE LLAIADLGIE LVQGYLFGRP QLTPQRIYHS QSFSSATVLN IESARTETPL QYLMFQDTPR MSAL
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