| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1186 |
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| Symbol | sodC |
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| ID | 5136732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1248952 |
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| End bp | 1249467 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532644 |
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| Product | superoxide dismutase, Cu-Zn |
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| Protein accession | YP_001217132 |
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| Protein GI | 147674669 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2032] Cu/Zn superoxide dismutase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCAAT TTACTTTGTT TGCGGTCGCC GCGTTTTTTT CTTCTTCGGT TTTGGCGCAA
GAAATGACCG TAGTGATGAC GGATTTGAGC TCTGGCCAAT CCGTGGGCAC CGTTACCTTA
ACTGATAGCG AGTATGGTAC GGTCTTTACT CCGCAGTTAA CTGGCTTGCC AGCCGGTTTG
CACGGTTTTC ATGTACACGC GAATGGCTCA TGTGAAACCT CGTCCAAAGA TGGCAAAACC
GTATTAGGTG GCGCTGCGGG TGGGCATTAT GATCCGCAAA ACACGGGAAA ACACGGCTAT
CCGTGGACCA ACGACAATCA CTTGGGTGAT CTCCCAGCTT TGTACGTGGA TGCGCAAGGC
CAAGCAAATC AACCCGTTTT GGCATCCCGC TTCAAAATGG CAGAGGTAAA AGGTAAAGCT
TTGATGGTCC ACGCGGGCGG GGATAACCAT TCCGACCATC CAATGCCTTT GGGTGGCGGT
GGTGCGCGCA TCGTATGTGG TGTGATTGGT TTATAA
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| Protein sequence | MNQFTLFAVA AFFSSSVLAQ EMTVVMTDLS SGQSVGTVTL TDSEYGTVFT PQLTGLPAGL
HGFHVHANGS CETSSKDGKT VLGGAAGGHY DPQNTGKHGY PWTNDNHLGD LPALYVDAQG
QANQPVLASR FKMAEVKGKA LMVHAGGDNH SDHPMPLGGG GARIVCGVIG L
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