| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1183 |
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| Symbol | |
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| ID | 5136371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1243853 |
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| End bp | 1244764 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532641 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001217129 |
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| Protein GI | 147675267 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTATTAA CAAAACGTTC TATAAAAGAG AACAAAGCGA TGCGACATCT GAATTTTCAC
CATTTACATT ACTTCTGGAC TGTGGCTAAA GAGGGGCATC TCACTCGTGC TGCGCAGCAA
CTCAATGTGT CACAATCGGC GCTTTCTTCA CAAATTCGTC AGTTAGAAGG TCAATTGGGG
CATGATCTGT TTGTGCGCCA AGGGCGCAGT TTGCAGCTCA CCGAAGTTGG GCATTTGGTT
CTGGAATATG CCGAAAGCAT ATTTAACTTG AGCGGCGAGC TGCTTTCGAT CATGGAGAGC
GGTGAATTAC AACGGGTACA GCAATTAAGG ATTGGCTCGG TGGCGACCTT ATCGCGAAAC
TTTCAGGAAA ACTTTTTACG CCCTGTGCTC GGTAAATCGG ATGTGCGGCT TATCTTGTCT
TCCTCTACCT TGGAAGATCT TCTAGGTCAG TTACAAATGC ATAAGCTCGA CCTGATCCTT
TCCAATCGTC CGGTACCGAG TGACTCAACG CAGCCTTGGC GTTGTAAGCG CATTGCACAG
CAAAGTGTCT GCCTTGTCGG ACCGCCGAGC GACACTTTGC GCCGTTATCA ATTTCCGCAG
GATTTACCTA AAGTGAAAAC CTTGGTGCCG GGGGCAAGCA GTGAAATTCG GCTGCAATTT
GATCTGTATT GTGAACAGTT AGGGTTAGCG GTAACGCCCT ACGCTGAAGT CGATGATATG
GCGATGTTGC GTCTATTGGC GCGCGATGTG GAAGGCGTCA CTGTGGTGCC CGAGGTCGTG
GTACAAGATG AAATTGAAAC AGGGAGGCTG TGCAATTACG GAACACTGGA CGCGGTGACC
GAAAGCTTTT ACGCGATCAC CACGAAACGC CATTTTGATA TGTCTATTGT CAATCGGTTG
CTCGACAACT AG
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| Protein sequence | MLLTKRSIKE NKAMRHLNFH HLHYFWTVAK EGHLTRAAQQ LNVSQSALSS QIRQLEGQLG
HDLFVRQGRS LQLTEVGHLV LEYAESIFNL SGELLSIMES GELQRVQQLR IGSVATLSRN
FQENFLRPVL GKSDVRLILS SSTLEDLLGQ LQMHKLDLIL SNRPVPSDST QPWRCKRIAQ
QSVCLVGPPS DTLRRYQFPQ DLPKVKTLVP GASSEIRLQF DLYCEQLGLA VTPYAEVDDM
AMLRLLARDV EGVTVVPEVV VQDEIETGRL CNYGTLDAVT ESFYAITTKR HFDMSIVNRL
LDN
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