| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1171 |
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| Symbol | |
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| ID | 5135364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1231705 |
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| End bp | 1232919 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532629 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217117 |
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| Protein GI | 147675384 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.267769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTCT TGTTACAGCA ATCTTGGCAA ACTTTGCTCG CTCATCGCCT GAAAAGCGTA
TTGGCGATCA CCGCGATTAG CTGGGGGGTG ATTTCTGTGG TGATCTTGAT GGCGCTCGGC
GAAGGGTTTT ATCGTGCTCA AACCGAATCC TTTCGCTTTC TGTTGCAAGA AACACAAATG
GTCGCCTCCG GCCAGACCAG CGAAGTGTGG CAAGGCATGC CTGCGAGACG CCCGATTCAA
CTGACCGAAT CGTTAATGCG TGAAGTCGCA CAACGTCCGG AGATCCAACG TTACTCCATC
GTCTATGAGA ATCGAGAAGT CTCCATCACC CAACAGCGAG GGACAGCGAT TGGTAGTATG
GTCAGTGGTG TGGATAGAGG GTATTTCTCT CTTGCTGGAT TAAAACTCAC CTTAGGTTCA
CGAGATTTCA GCCTTCATGA TCAACACAAC CACCGCCGTG TGGCCATTCT TGGCGATCAC
GTTGCAGCCA CCAGCCAGCT TAAGATTGGA GATGAATTCA AAATTCGTGG CATCGCTTTT
CGAGTGATTG GCATTATGGA TGATGAAAGC AGCCGCTTTT CATTTGGTGA TAACCAAAAA
GTGTTTATTC CAAGCTCCAC ATTTAAAGAC ATTTGGGATA CCCAACCGAA CATGATGTTG
GTACTGCCCG CTCAAGGTGT TTCAAGCTGG GCGTTACGCG AGCAGTTACG TCACACTTTT
GCTCAGCGGT TACATTTCTC ACCTGAGGAT CAAGAGGCGG TCTTTCTCCC CGATTTCGGC
AGTGGTGTTG CGGTGATCAC TGCCATTTTA CGAGGAATTC AAGCCTTTCT CGCCGCCAGT
GGCATGATGA CTATGGCTGT CGGCATCTTA GGCGTTGCCA ATATGATGTT TTTAGCGGTG
ACCGAGCGTA CGCGAGAAAT CGGAGTGCGT TTAGCCATTG GTGCTACACC GCAACGAATT
CAACAGCAGT TTTTATTAGA AGGATTGCTG CTGGTGGTCA TCGGGGCGTT AGCAGGCTTA
CTGCTGGCCT ACTTTGGCGT GTTGCTGCTT AATCACCTTG GCCTACCCAC ATGGCTTGGC
GAGCCGGTGA TCACTTCCAC CACCGTCTGT CTTTCTATGT TGGTGACTAG CATTTTAGCC
TTAGCGGCGG CCTACTTCCC AGCTCGCAGA GCGGCGCAAT TAGAGCCCGT CATTGCGCTC
AGTAGTCGGA GTTAA
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| Protein sequence | MRLLLQQSWQ TLLAHRLKSV LAITAISWGV ISVVILMALG EGFYRAQTES FRFLLQETQM
VASGQTSEVW QGMPARRPIQ LTESLMREVA QRPEIQRYSI VYENREVSIT QQRGTAIGSM
VSGVDRGYFS LAGLKLTLGS RDFSLHDQHN HRRVAILGDH VAATSQLKIG DEFKIRGIAF
RVIGIMDDES SRFSFGDNQK VFIPSSTFKD IWDTQPNMML VLPAQGVSSW ALREQLRHTF
AQRLHFSPED QEAVFLPDFG SGVAVITAIL RGIQAFLAAS GMMTMAVGIL GVANMMFLAV
TERTREIGVR LAIGATPQRI QQQFLLEGLL LVVIGALAGL LLAYFGVLLL NHLGLPTWLG
EPVITSTTVC LSMLVTSILA LAAAYFPARR AAQLEPVIAL SSRS
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