| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1169 |
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| Symbol | |
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| ID | 5135587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1229320 |
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| End bp | 1230453 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532627 |
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| Product | membrane-fusion protein |
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| Protein accession | YP_001217115 |
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| Protein GI | 147674153 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0146013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAC GTTGGACACT TCTTGCAACC TTAGTAGGTG TTGGCTTGGC AGGTGGTTAT
TACACTCTCA CTTATACCCC TGAGTCTTCA TCCCCATTAC CGACCCTCAA CGTCAGCCGG
GGAACAATAG AGAAACAGGC GGTCGCGGTT GGTCAAATCA TGCCTTCACA TTCGGTGGCA
ATTAAATCGC AAATCAACGG TATTGTCGGT GAAATTTATG TGCGTGAAGG GCAACATGTT
GAGCAAGGAC AACCCTTGAT TAAGGTTCGT CCGAATCCAA CACCACAGGC GTTGACCGAT
GCCTCCACAG AACTGATGCA AAGTGAAGCA AATCTTGAAT CAGACTTACA ACGCTTAGCC
AACCTTGAGC GCTTAGTGAA ACAGCAAATC ATTCCTGCCA ATTATGATGA TTACGTCCGC
GCGAAAGCCG ACGTCAAAGC TAAGCAAGCC GAAGTGCAGC AAAAACGCCA AAACCTAGAG
TTGATCCGCA GCGGTGAAGC TTCGATTGGG CAAGCCAAGC TCTCCTCTAC TCTATATGCC
CCGATCAGTG GCACGATTTT AAATATCAAA GTCGAGGTCG GAGAGCCGAT CATCTCTACC
GAGTCGAGCC AAGCGGCAAC AGAAATGATC CAGTTAGCGG ATATGAAAAA TATCGTGTTT
AAAGGCAGTG TCAGTGAACA TGATGCTGCG CAGCTGAATG CCGGCATGCC CGCCAGTATT
ACCGTTGCCC CCTACCCTGA GCAGGTGATC AATGGTCAGT TGACCAAAGT CGCGATTCAA
TCGGAGCGCT TAAATAATCC TGAAAACAAA GATGGCAAAA GTTTTGATAA CGGATTTCAA
GTCGAAATCG GACAATTAGA CATCCCTGAA AACATGACAT TACGTTCTGG ATTCTCTGCC
AGCGCAAAAA TCACCTTACA ACGTGCCGCG GATGTTATTA CCCTTCCGGA GCGCGCATTA
CAGTTTGAGG GCGAAACGCC CATGGTGCTG ATTGCGGATG GCTCTGCACA AGGCTATACC
GCTCATCCGG TCAAGCTTGG GCTTTCTGAC GGCGTACAGG TTGAGATCTT AGAAGGCGTA
GCCGAAAAAG ACAGCATAGT GGATAACAGC ATGCTGGGAG GCCAGCATGA ATAA
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| Protein sequence | MAKRWTLLAT LVGVGLAGGY YTLTYTPESS SPLPTLNVSR GTIEKQAVAV GQIMPSHSVA
IKSQINGIVG EIYVREGQHV EQGQPLIKVR PNPTPQALTD ASTELMQSEA NLESDLQRLA
NLERLVKQQI IPANYDDYVR AKADVKAKQA EVQQKRQNLE LIRSGEASIG QAKLSSTLYA
PISGTILNIK VEVGEPIIST ESSQAATEMI QLADMKNIVF KGSVSEHDAA QLNAGMPASI
TVAPYPEQVI NGQLTKVAIQ SERLNNPENK DGKSFDNGFQ VEIGQLDIPE NMTLRSGFSA
SAKITLQRAA DVITLPERAL QFEGETPMVL IADGSAQGYT AHPVKLGLSD GVQVEILEGV
AEKDSIVDNS MLGGQHE
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