| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1167 |
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| Symbol | |
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| ID | 5137053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1226978 |
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| End bp | 1227907 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640532625 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001217113 |
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| Protein GI | 147673422 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.136839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGCCC CCGAAATCAA TTTGCGCAGC ATTGATTTAA ATTTATTAAC GATTTTAGAA
AAGTTATTGA TTCATAAGCA TATTAGCCAA GCCGCACAAG CATTGAATAT GAGCCAACCC
GCCGTCAGTC GAGCCCTCAT GCGTTTGCGT GAACAATTTG GTGATCCACT GCTGGTGAAA
GTAAAAAATG AGTACCGATT AACCGCAAAA GGTGAGCGCC TCTGCAGTGA ACTGGAGAGA
ACGCTCAATA CCATTCGACA CATGTTGGTA GATGACAAGT TTGACCCAAT GCACTATTCC
GGTGTGTTCA CTATTGGTGC ATTGGATTTC GAGATGATGA TGATTGTGCC GAAATTGTTG
GCGCGTTTTC AACAACGTGC CCCTAATTTG AAGTTACAAA TCGTACCGTA TAACGCCTAT
ATGCCGCTGC ATGATTACTT GGAAAAGGTG GCGGATTTAC TGCTGTATTC CACTGATGAG
TCACCCACCA ATGTGTTTAA GCAGCGTTTA TTTAATGACA ACTATGCTGT GGTCATGTGT
AGAAACCATC CATTAGCCAA TCAACCGATA ACACTGGAGA GTTATTGCCA GAGTCGACAT
GTGATCATTT CCGGTAATGG TTTAGGAAAA ACGGATATGG ATCATGAGCT GAAAAAGCTC
AATTATCAGC GCGAAGTGGT GGCATCGTTG CCACATTTTT CGATGGTGCC GGAGTTACTG
ATCAACACCG ATCTGATTGC CACCTTACCA AGACGTTTGG TGACTCACTT AGGCCAGCGT
TATGAGATAA CCGTGGCTGA TTTACCTTTC TATACTGCCG ATTTTCGAGT GGAACAATTT
TGGCATCTTA TTCATCACAG TAGCCCGATT CATCAGTGGG TGAGGCAAGA GATCAAAAAT
TTAGTCTATG AAGAGATCGA TAAGAAATAA
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| Protein sequence | MVAPEINLRS IDLNLLTILE KLLIHKHISQ AAQALNMSQP AVSRALMRLR EQFGDPLLVK
VKNEYRLTAK GERLCSELER TLNTIRHMLV DDKFDPMHYS GVFTIGALDF EMMMIVPKLL
ARFQQRAPNL KLQIVPYNAY MPLHDYLEKV ADLLLYSTDE SPTNVFKQRL FNDNYAVVMC
RNHPLANQPI TLESYCQSRH VIISGNGLGK TDMDHELKKL NYQREVVASL PHFSMVPELL
INTDLIATLP RRLVTHLGQR YEITVADLPF YTADFRVEQF WHLIHHSSPI HQWVRQEIKN
LVYEEIDKK
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