Gene VC0395_A1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1166 
SymbolperA 
ID5135666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1224739 
End bp1226913 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content51% 
IMG OID640532624 
Productcatalase/peroxidase 
Protein accessionYP_001217112 
Protein GI147674207 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0376] Catalase (peroxidase I) 
TIGRFAM ID[TIGR00198] catalase/peroxidase HPI 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.801479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCACA ATAAAGCGGG TTCAAGCGGT CAATGCCCTG TCATGCACGG TGGCTTGACT 
TCGGCGAGCA TGTCCAACAT GGACTGGTGG CCTAAAGCGC TAAACTTAGA CATCCTTCAT
CAGCATGACA GCAAAACCAA TCCACTTGGT GCTGATTTCA ACTATCGCGA AGAGCTGAAA
AAGCTTGATG TAGAAGCGCT AAAACGCGAT CTGAAAGCGT TAATGACCAA TAGCCAAGAG
TGGTGGCCGG CCGACTGGGG ACATTACGGC GGTTTGATGA TTCGTATGGC ATGGCACTCT
GCGGGTACCT ACCGTATTGC CGATGGTCGT GGCGGCGGCG GTACCGGTAA CCAACGTTTT
GCCCCACTGA ACTCATGGCC TGATAACGCC AACTTAGATA AAGCACGCCG TTTGCTGTGG
CCTATCAAAC AAAAGTACGG TAACAAAATC AGCTGGGCGG ATTTGATGAT CCTCGCGGGG
AACATGGCTT ATGAATCGAT GGGCCTCAAA ACCTTTGGTT TTGCCTTTGG CCGCGAAGAC
ATCTGGCACC CAGAAAAAGA CATTTACTGG GGTTCTGAAA AAGAGTGGCT TGCCAAATCT
GGCGGTGAAA ATAGCCGTTA CTCTGGTCAG CGCGATCTCG AAAACCCACT TGCGACCGTC
ATGATGGGGC TTATCTACGT CAACCCAGAA GGTGTGGATG GAAACCCAGA TCCACTCAAA
ACGGCGCAAG ACATGCGTGT CACTTTTGCT CGCATGGCAA TGAATGACGA AGAGACCGTT
GCTCTGACGG CTGGCGGCCA TACGGTGGGT AAAGCGCACG GTAATGGCAA AGCTTCTAAC
CTTGGCCCTG ATCCTGAAGG CGCTGAACTG CACGAACAAG GCTTAGGTTG GAACAACCAC
ACCAGCCGTG GGATTGGTCG AAACACCGTC ACCAGTGGTA TTGAAGGTGC ATGGACCACT
CACCCAACCC GTTGGGATAA CGAATATTTC TACTTACTGC TCAGCTATGA ATGGCAGCTC
ACTAAGAGCC CTGCAGGTGC ATGGCAATGG GAACCTGTCA ACATCAAAGA GGAAGATAAA
CCGGTTGATG TGGAAGACCC AAGTATTCGC TACAACCCAA TGATGACCGA TGCCGATATG
GCTCTGAAAA TCGATCCTGA ATATCGCAAG ATTTCAGAGC GCTTCTACAA AGATCCCGCT
TACTTCTCAG AAGTGTTTGC GCGAGCTTGG TTTAAGCTCA CTCACCGCGA TATGGGACCA
AAAGCGCGCT ACTTTGGCCC AGATGTTCCG GCAGAAGATT TGATCTGGCA AGACCCTGTT
CCAGCAGGTC GTAAAGATTA TGATGTCAAT GCGGTCAAAG CAAAAATCGC GGCAAGCGGT
CTAAGCATCA GTGAAATGGT CAGCACCGCT TGGGATAGCG CTCGTACTTT CCGTGGTTCT
GATAAACGTG GGGGAGCCAA CGGGGCGCGT ATTCGCCTCG CTCCACAAAA AGATTGGGAA
GGCAACGAAC CTGCGCGTCT TGGTAAAGTT CTGGCGGTAT TAGAGAAAAT TGCCGCTGAA
TCTGGCATCA GTATCGCCGA TACGATTGTT CTGGCTGGTA ACGTAGGTAT CGAACAAGCG
GCTAAAGCCG CGGGCGTGAA TGTGACCGTA CCGTTCGCAC CGGGACGCGG CGATGCGACA
ATCGAACAAA CCGATGTTGA GTCCTTTGAA GTGCTTGAGC CTCTCGCGGA TGGCTTCCGT
AACTGGCAGA AAAAGCATTA TGTGGTCACA CCGGAAGAAA TGTTGCTCGA CAAAGCGCAA
CTGCTGCGCC TCACCGCTCC AGAAATGACG GTGTTAATTG GTGGCATGCG TGTGCTTGGC
ACTAACTACG GTGGCAGCCA ACACGGCGTG TTTACCGACC GCGTGGGTGC GTTGACCAAC
GATTTCTTCG TTAACCTCAC CGACATGAGT TACACCTGGA AACCAACTGG TCGCAACTCT
TACGAGATTG TTGAACGTAA GAGCGGCAAA GTGAAGTGGA CAGCCACTCG TGTTGATCTG
GTGTTTGGTT CTAACTCCAT CCTACGTGCT TATGCGGAAG TGTACGCACA GGACGACAAC
AAAGAAAAAT TCGTCAAAGA CTTTGTTGCC GCATGGACCA AAGTAATGAA TGCGGATCGA
TTTGATCTGG TGTAA
 
Protein sequence
MEHNKAGSSG QCPVMHGGLT SASMSNMDWW PKALNLDILH QHDSKTNPLG ADFNYREELK 
KLDVEALKRD LKALMTNSQE WWPADWGHYG GLMIRMAWHS AGTYRIADGR GGGGTGNQRF
APLNSWPDNA NLDKARRLLW PIKQKYGNKI SWADLMILAG NMAYESMGLK TFGFAFGRED
IWHPEKDIYW GSEKEWLAKS GGENSRYSGQ RDLENPLATV MMGLIYVNPE GVDGNPDPLK
TAQDMRVTFA RMAMNDEETV ALTAGGHTVG KAHGNGKASN LGPDPEGAEL HEQGLGWNNH
TSRGIGRNTV TSGIEGAWTT HPTRWDNEYF YLLLSYEWQL TKSPAGAWQW EPVNIKEEDK
PVDVEDPSIR YNPMMTDADM ALKIDPEYRK ISERFYKDPA YFSEVFARAW FKLTHRDMGP
KARYFGPDVP AEDLIWQDPV PAGRKDYDVN AVKAKIAASG LSISEMVSTA WDSARTFRGS
DKRGGANGAR IRLAPQKDWE GNEPARLGKV LAVLEKIAAE SGISIADTIV LAGNVGIEQA
AKAAGVNVTV PFAPGRGDAT IEQTDVESFE VLEPLADGFR NWQKKHYVVT PEEMLLDKAQ
LLRLTAPEMT VLIGGMRVLG TNYGGSQHGV FTDRVGALTN DFFVNLTDMS YTWKPTGRNS
YEIVERKSGK VKWTATRVDL VFGSNSILRA YAEVYAQDDN KEKFVKDFVA AWTKVMNADR
FDLV