| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1164 |
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| Symbol | |
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| ID | 5135417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1221820 |
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| End bp | 1222854 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532622 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001217110 |
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| Protein GI | 147675752 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGGACTC AGTTTGAAGG ATTGTTGATG GCAACCATAA ACGATGTGTG TAAATTGGCG
GGTGTCTCCA AAGCCACGGT ATCACGAGTG CTGAATGAGA CAGGCCAAGT CAAAGCACAA
ACGCGTGAAG CGGTACTTGC CGCCATGCAG CAGCTCGGTT ATCAGCCCAA CAGTTTGGCG
CAGGCGCTCG CTACCAATAC CACAAACTCA ATTGGCTTGG TGCTGCCGCA TTTTGAGAGC
AGCTATTTTG GTTCGATTTT GTTTGAAGCC GAACAAGGCG CGCAGAAAGC TGGGAAAAAA
CTGCTGGTTA TGAACAGCAA AAACAGTGAG CAAGGCGAAA AAGAAGCGGT CGCCACATTA
GCGGCGCAGC GTTGTGATGC GATCTTGCTG TACAGTCGTC ATTTGAATGA GGTGCAATTA
CTTGAATTAC AACAGCAACA TCCATCGCCC TTAGTGATCC TCAATCGCCG TTTACATCAC
CCGCAATTGC ACAGCTTTGG GCTCGATCAA ACGCAAATTG CCCAGTTAGC GATGCAGCAT
TTGTTGAATT TAGGGCATCG TCAAATTGCC TGCATTACAT CGCCGTTGGT GAGCGAGACG
GGAAAAATTC GTTATCAGGT CTATCAACAA GCGTTACATG AGCAAGGGAT AGAGTTGAGC
TCGTCCTTGG TCATTGAAGG GGATAACACG CTGCTTGGTG GTTATCAGGC AATGCAACAA
CTGCTGCAAC AAGGCATTTC CATGACGGCT GTTTTTGCCT GTAACGATGA TATGGCGCTC
GGTGCAATGC GTGCCATGCA TGAACATGGC ATTCATGTAC CCAAACAAGT TTCCATAATC
GGGATTGATA ATGAACCCGC GGCGGCTTTT GCTATCCCGA GTTTATCGAG CGTGAGTCTA
CCGATCGGCG AGTTAACTCA GCAAGCAATC AGTTTGGCTG TCGAGATTGC TAATAAAAAA
CCACAAGATG CACAGCACAG GCTCTATCAA GGGAGTTTGA TCGCCCGTGA ATCCACCATA
GCGCTCAAAC TATGA
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| Protein sequence | MRTQFEGLLM ATINDVCKLA GVSKATVSRV LNETGQVKAQ TREAVLAAMQ QLGYQPNSLA
QALATNTTNS IGLVLPHFES SYFGSILFEA EQGAQKAGKK LLVMNSKNSE QGEKEAVATL
AAQRCDAILL YSRHLNEVQL LELQQQHPSP LVILNRRLHH PQLHSFGLDQ TQIAQLAMQH
LLNLGHRQIA CITSPLVSET GKIRYQVYQQ ALHEQGIELS SSLVIEGDNT LLGGYQAMQQ
LLQQGISMTA VFACNDDMAL GAMRAMHEHG IHVPKQVSII GIDNEPAAAF AIPSLSSVSL
PIGELTQQAI SLAVEIANKK PQDAQHRLYQ GSLIARESTI ALKL
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