Gene VC0395_A1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1162 
Symbol 
ID5136201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1221323 
End bp1221685 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content52% 
IMG OID640532620 
Producthypothetical protein 
Protein accessionYP_001217108 
Protein GI147675253 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATAC ATCGTATTAA TCCAGGCACT CGTTGGTCTG ACATCACCGT GTTTAATGGC 
ATTGCCCATT TTGTTGAAGT CGCCGATAGC GACACGTCGG CCGATATGCA AGGCCAAGTT
GAGCAGGTTC TCGCGCAAGC AGAGCGCCAA TTGGCGAAGA TTGGCAGCGA TCGTTCACGC
ATCTTATCGG TGACGATTTA TGTCACGGAT TTTGCCGACC TCCCAGTGCT TAACCAAATT
TGGGATGCGT GGTTCCCAGA AGGTTGCGCC CCAAGCCGAG CGTGCGTGAA AGCGGAGCTG
GCTGACCCAG ACTATAAAGT GGAAATGGCT TTTGTGGCGG CTTCGGGCGA GCAGTATCAA
TAA
 
Protein sequence
MTIHRINPGT RWSDITVFNG IAHFVEVADS DTSADMQGQV EQVLAQAERQ LAKIGSDRSR 
ILSVTIYVTD FADLPVLNQI WDAWFPEGCA PSRACVKAEL ADPDYKVEMA FVAASGEQYQ