| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1158 |
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| Symbol | ugpC |
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| ID | 5137054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1218121 |
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| End bp | 1219239 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532616 |
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| Product | glycerol-3-phosphate transporter ATP-binding subunit |
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| Protein accession | YP_001217104 |
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| Protein GI | 147673046 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGACA TCAAACAACT GGTCAAAACT TACGATAACG GCCATCAAGC GGTGAAAGGC
GTGGATCTGT CGATTCATCA AGGGGAATTT ATCGTTTTAG TCGGCCCATC GGGCTGTGGC
AAATCCTCCA TTCTGCGCTC CATCGCAGGC TTAGAGAGCA TTACTTCCGG CGAAATTCAT
CTGGCGGGAC GCCGCGTCGA TAACGAAAAA CCGGCCAATC GCGACATCGC TATGGTGTTC
CAAAACTATG CGCTCTATCC GCATATGAGT GTCTACGATA ACCTCGCCTA CGGCCTTAAA
AATCGTGGTG TGGATAAACA AACCATCGCA ACGAAAATTG CTAAGGTTGC GAAAACCCTA
AAAATTGAAG AGTACTTAGA CCGAAAACCG GCCAAACTTT CCGGCGGACA ACGCCAGCGC
GTGGCAATGG GGCGTGCGAT TGTGCGCGAT CCGCAACTTT TTTTATTTGA TGAACCGCTC
TCGAACTTGG ATGCGGCGCT GCGCGCGCAC ATGCGCTTAG AAATCAAAAA ACTACAGCGT
GAGCTTGGCG TAACCAGTGT TTACGTCACC CATGATCAGG TGGAAGCGAT GACGCTTGCC
GATCGCATTG TGGTGGTCAA ACAGGGCGAA ATTGAGCAAG TTGGTACGCC AGCCGAAGTT
TACCATCAAC CTGCCAGTAC CTTTGTGGCG AGTTTTATCG GCAGCCCTGC AATGAACTTT
CTCCCTGCAT CTATCAAGCA AGGACAACTA CACATCGCAG GCAAGCACTG TTACTTGCCA
CAGTTTGACG CAATGAGTTC CGAAAACATC ACGCTAGGTA TTCGCCCTGA ACACGCCTCG
CTGCACCCGC TAACCAATGC GATTGAGTTA AAATTGGATA TTCAGGTCGT TGAGCCACTA
GGTCCGAACC AGCTGGTGCA TGGCAAAATT ATCGGCTTAG AAAGCGAGCA GGATTTCATC
GCGGTCACTG CAGAAATTCC GCTCGATGTG CATCAAACCC TGCCGATCTG GGTTGCGCTT
GAGCAACTGC ATCTTTTTGA TCAACAAGGT AAACGCTTTG TCCAGTCACA CCGTTCTTGT
ACACAGAGCA GCAAAGTCGC TAGCACTCGT CAGCAATAA
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| Protein sequence | MLDIKQLVKT YDNGHQAVKG VDLSIHQGEF IVLVGPSGCG KSSILRSIAG LESITSGEIH
LAGRRVDNEK PANRDIAMVF QNYALYPHMS VYDNLAYGLK NRGVDKQTIA TKIAKVAKTL
KIEEYLDRKP AKLSGGQRQR VAMGRAIVRD PQLFLFDEPL SNLDAALRAH MRLEIKKLQR
ELGVTSVYVT HDQVEAMTLA DRIVVVKQGE IEQVGTPAEV YHQPASTFVA SFIGSPAMNF
LPASIKQGQL HIAGKHCYLP QFDAMSSENI TLGIRPEHAS LHPLTNAIEL KLDIQVVEPL
GPNQLVHGKI IGLESEQDFI AVTAEIPLDV HQTLPIWVAL EQLHLFDQQG KRFVQSHRSC
TQSSKVASTR QQ
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