| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1157 |
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| Symbol | ugpE |
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| ID | 5135128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1217226 |
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| End bp | 1218068 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532615 |
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| Product | glycerol-3-phosphate ABC transporter, permease protein |
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| Protein accession | YP_001217103 |
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| Protein GI | 147674616 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTA ATCGACTCTC CGATCATTTG ATCCTTATCG CTGGCGCACT GTTTATGCTA
GTGCCGCTGT GGCTGATTTT CGCGAGCTCA ACCCATCAGC CAAACACCAT TGTCTCGGAA
GGTTTGCAAT GGACTCTTGG CGATAACCTC AGCGCAGTTT ATCAAGAAGC ATGGAATAAA
AGCCTCGGTT TTGCCGGTAA TGTCACCGCG CAAACCATGA TCGTTAACTC GATGATCATG
GGCTTGGGTT TTGCGATTGG CAAAATCGTA ATTTCGATGA TGGCCGCTTA CGCCTTGGTC
TACTTTCGTT TGCCTTATGC CAGTGCGTGG TTTTGGCTGA TTTTCATTAC CCTACTGCTG
CCGCTTGAAG TGCGGATCAT TCCCTCTTAT GAAGTGGTGT CCAATTTAGG CATGCTCAAT
AGCTACACAG GCTTAGTGCT GCCACTCATC GCCTCCGCTA CCGCGACGTT TTTCTTCCGT
CAGTTTTTTA AAACCATACC GGATGAACTG TTGGAAGCAG CTCAGCTTGA TAACGCAGGA
CCGGTGCGCT TTTTTATCGA TATTTTATTT CCCCTCTCGA AAACCATGAT GGCCGCGATT
TTCATCATCA TGTTTGTGGT GGGTTGGAAC CAATACCTGT GGCCGATCAT GATGACCACG
GATGAGCAAT ACAACACCAT AGTGATGGGC ATCAAACAGA TTCTCAATAA CATCAATGAA
ACCAGCTTGC CGCGTTATGA CTACGCGTTT GCCATGGTGA TCCTCGCCAT GCTGCCACCG
GTTTTGGTGG TGGTGATTTT CCAACGTTGG TTTGTAAAAG GATTAGTCGA AAGTGAAAAA
TAA
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| Protein sequence | MKSNRLSDHL ILIAGALFML VPLWLIFASS THQPNTIVSE GLQWTLGDNL SAVYQEAWNK
SLGFAGNVTA QTMIVNSMIM GLGFAIGKIV ISMMAAYALV YFRLPYASAW FWLIFITLLL
PLEVRIIPSY EVVSNLGMLN SYTGLVLPLI ASATATFFFR QFFKTIPDEL LEAAQLDNAG
PVRFFIDILF PLSKTMMAAI FIIMFVVGWN QYLWPIMMTT DEQYNTIVMG IKQILNNINE
TSLPRYDYAF AMVILAMLPP VLVVVIFQRW FVKGLVESEK
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