Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1151 |
Symbol | exbD2 |
ID | 5135406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1211555 |
End bp | 1211959 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640532609 |
Product | TonB system transport protein ExbD2 |
Protein accession | YP_001217097 |
Protein GI | 147674469 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.717092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCTAG GGCGCAGAAC GTCAAAGCAA GAAGAAGCGC AGATCGATCT GACTTCGATG CTCGACATCG TCTTTATCAT GTTAATTTTC TTCATTGTGA CCAGCTCGTT TGTGCGCGAA TCGGGTGTGG AAGTCAATCG CCCGACAGCG GCGCATGCCG TAAGCCAAAA ACAGGCTGGG ATTTTTGTGG CGATTACCGC GGCCAACGAC ATCTACATTG ATAAACGTCA GGTAGACGTG GAGCGAGTGC AAGCGACTTT AGAGCATCTG TTGTTAGACC AACCGGATGC TTCCTTAGTG ATTCAAGCTG ATGAGCATGC CTTTAACGGC ACCGTGGTCA AAGTGATGGA TGCGGCGAAA GGCGCTGGAG TAAAAAGCAT TGCATTAGCG GCGGAGAAAC CCTAA
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Protein sequence | MRLGRRTSKQ EEAQIDLTSM LDIVFIMLIF FIVTSSFVRE SGVEVNRPTA AHAVSQKQAG IFVAITAAND IYIDKRQVDV ERVQATLEHL LLDQPDASLV IQADEHAFNG TVVKVMDAAK GAGVKSIALA AEKP
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