Gene VC0395_A1151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1151 
SymbolexbD2 
ID5135406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1211555 
End bp1211959 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content50% 
IMG OID640532609 
ProductTonB system transport protein ExbD2 
Protein accessionYP_001217097 
Protein GI147674469 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.717092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTAG GGCGCAGAAC GTCAAAGCAA GAAGAAGCGC AGATCGATCT GACTTCGATG 
CTCGACATCG TCTTTATCAT GTTAATTTTC TTCATTGTGA CCAGCTCGTT TGTGCGCGAA
TCGGGTGTGG AAGTCAATCG CCCGACAGCG GCGCATGCCG TAAGCCAAAA ACAGGCTGGG
ATTTTTGTGG CGATTACCGC GGCCAACGAC ATCTACATTG ATAAACGTCA GGTAGACGTG
GAGCGAGTGC AAGCGACTTT AGAGCATCTG TTGTTAGACC AACCGGATGC TTCCTTAGTG
ATTCAAGCTG ATGAGCATGC CTTTAACGGC ACCGTGGTCA AAGTGATGGA TGCGGCGAAA
GGCGCTGGAG TAAAAAGCAT TGCATTAGCG GCGGAGAAAC CCTAA
 
Protein sequence
MRLGRRTSKQ EEAQIDLTSM LDIVFIMLIF FIVTSSFVRE SGVEVNRPTA AHAVSQKQAG 
IFVAITAAND IYIDKRQVDV ERVQATLEHL LLDQPDASLV IQADEHAFNG TVVKVMDAAK
GAGVKSIALA AEKP