Gene VC0395_A1150 details

Gene Information

• Locus tag: VC0395_A1150
• Symbol: tonB2
• ID: 5136299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 1210935
• End bp: 1211555
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640532608
• Product: tonB2 protein
• Protein accession: YP_001217096
• Protein GI: 147675420
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0810] Periplasmic protein TonB, links inner and outer membranes
• TIGRFAM ID: [TIGR01352] TonB family C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 0.595511
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGACGCT TGATCTTAGC CAGCCCGATT GCGTTGTTAG TGACACTGGC GCTGTTTAGC 
TTGATGGCTT GGATGGTGGA TAACGGCGGA AAGAGCATTC CTAAACCGAC TGCTGCGCTC 
AGCTTTACCA TGGTCATGGC TGAGCAGGAG CAAGATGTAC AACGCAGACA ACGTAGCGTA 
CCAGAGCAGC CACAAGTCCC GCAGGTGCCG ACACAAGCGC CTGCAAAAGC TGAACAAACG 
GCGGCACTCG ATGTTTCAGA CCTCAATCCG GTGATGGACT TAAACCTCAG TACCGCTATG 
GAAGGGGTCG CCGTTAACGC GCCTCAGTTT GGTGATTTCG CGGTTAACCA GCAGGTGATG 
CCGCTACACA GGGTTGAGCC CAACTATCCA GCGAAAGCTC TGCAACGGGG AGTGGAAGGT 
TACGTTATCT TGCGTTTTAC CATCGATGAG TTGGGAAAAA CGCGCGATAT CGAAGTGGTG 
GATGCTAACC CGAAACGCTA TTTTGAGCGT GAGGCGATGC TGGCTCTGCG TAACTGGAAA 
TACCAGTCTA AGATAGTGGA TGGTCAACCC GTAAGCCAAC CCGGACAAAC GGTTCGACTG 
GAGTTTAAAC TGAACAAATG A 

 

Protein sequence

MGRLILASPI ALLVTLALFS LMAWMVDNGG KSIPKPTAAL SFTMVMAEQE QDVQRRQRSV 
PEQPQVPQVP TQAPAKAEQT AALDVSDLNP VMDLNLSTAM EGVAVNAPQF GDFAVNQQVM 
PLHRVEPNYP AKALQRGVEG YVILRFTIDE LGKTRDIEVV DANPKRYFER EAMLALRNWK 
YQSKIVDGQP VSQPGQTVRL EFKLNK