Gene VC0395_A1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1144 
Symbol 
ID5137083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1204556 
End bp1205422 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content45% 
IMG OID640532602 
Producthypothetical protein 
Protein accessionYP_001217090 
Protein GI147673857 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3001] Fructosamine-3-kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0195767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCCAG CAATTATTCA ACAATTGTCC GAGCAGTTGG GCAAAGATTT TCACCTCGTT 
GAAAAAGAAA AAGTGCATGG GGGTGACATT AATGAATGCT TTATGGTTAG CGATGGAATA
GATCGTTATT TTGTGAAAAC AAACCAACGC GAGTATCTGA CCAAATTTAC CGCCGAGGTG
GAAAACTTGC GTGTGATGCG CGAGTCCAAT ACCGTTCAAG TACCCGAGTA CATTCTGCAC
GGCACGAGCA AAACGCATGC TTATCTGGTG CTTAATTATT TAGCGACCAA GCCATTAGAT
GACGCCGAAC GAAGTTACGA ATTTGGGGTG CAACTGGCCA ACCTGCATCG CTGGGGAGAG
CAAAAAGAGT TTGGCTTCGA TATCGATAAT TACATTGGAG CGACAGTTCA ACCTAACCCT
TGGCACAAAA AGTGGGCATT ATTTTTTGCA GAGCAGCGTA TCGGTTGGCA GCTACAGCTA
ATGCAAGAAA AAGGGGTCAA CCTCACCAAC ATCAATGAGT TTGTTGAGAT GGTCAAAACT
CGTTTGGCCA ACCACTCTCC GCGCCCTTCT CTACTGCATG GTGATCTCTG GTTTGGCAAT
GTCGCCAACA TCGTTAATGG CCCCTTGTGC TTTGACCCTG CTTGTTATTG GGGAGATCGC
GAGTGTGATA TTGCTCTCGC TGAATGGTTT GGTGGTTTTC AACCTGAGTT CTTCCAAGGC
TATGAAAGCG TGTGGCCACT CGATTGGGGT TATGAAGAAC GAAAAGATAT CTACAACCTT
TATCATGTAC TAAACCACTA TAACCAGTTT GGTGGGCATT ATTTGGATGA AGCACAGAAA
TTGATTGAGA AGATATTGTC TTACTGA
 
Protein sequence
MWPAIIQQLS EQLGKDFHLV EKEKVHGGDI NECFMVSDGI DRYFVKTNQR EYLTKFTAEV 
ENLRVMRESN TVQVPEYILH GTSKTHAYLV LNYLATKPLD DAERSYEFGV QLANLHRWGE
QKEFGFDIDN YIGATVQPNP WHKKWALFFA EQRIGWQLQL MQEKGVNLTN INEFVEMVKT
RLANHSPRPS LLHGDLWFGN VANIVNGPLC FDPACYWGDR ECDIALAEWF GGFQPEFFQG
YESVWPLDWG YEERKDIYNL YHVLNHYNQF GGHYLDEAQK LIEKILSY