Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1144 |
Symbol | |
ID | 5137083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1204556 |
End bp | 1205422 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640532602 |
Product | hypothetical protein |
Protein accession | YP_001217090 |
Protein GI | 147673857 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3001] Fructosamine-3-kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0195767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCCAG CAATTATTCA ACAATTGTCC GAGCAGTTGG GCAAAGATTT TCACCTCGTT GAAAAAGAAA AAGTGCATGG GGGTGACATT AATGAATGCT TTATGGTTAG CGATGGAATA GATCGTTATT TTGTGAAAAC AAACCAACGC GAGTATCTGA CCAAATTTAC CGCCGAGGTG GAAAACTTGC GTGTGATGCG CGAGTCCAAT ACCGTTCAAG TACCCGAGTA CATTCTGCAC GGCACGAGCA AAACGCATGC TTATCTGGTG CTTAATTATT TAGCGACCAA GCCATTAGAT GACGCCGAAC GAAGTTACGA ATTTGGGGTG CAACTGGCCA ACCTGCATCG CTGGGGAGAG CAAAAAGAGT TTGGCTTCGA TATCGATAAT TACATTGGAG CGACAGTTCA ACCTAACCCT TGGCACAAAA AGTGGGCATT ATTTTTTGCA GAGCAGCGTA TCGGTTGGCA GCTACAGCTA ATGCAAGAAA AAGGGGTCAA CCTCACCAAC ATCAATGAGT TTGTTGAGAT GGTCAAAACT CGTTTGGCCA ACCACTCTCC GCGCCCTTCT CTACTGCATG GTGATCTCTG GTTTGGCAAT GTCGCCAACA TCGTTAATGG CCCCTTGTGC TTTGACCCTG CTTGTTATTG GGGAGATCGC GAGTGTGATA TTGCTCTCGC TGAATGGTTT GGTGGTTTTC AACCTGAGTT CTTCCAAGGC TATGAAAGCG TGTGGCCACT CGATTGGGGT TATGAAGAAC GAAAAGATAT CTACAACCTT TATCATGTAC TAAACCACTA TAACCAGTTT GGTGGGCATT ATTTGGATGA AGCACAGAAA TTGATTGAGA AGATATTGTC TTACTGA
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Protein sequence | MWPAIIQQLS EQLGKDFHLV EKEKVHGGDI NECFMVSDGI DRYFVKTNQR EYLTKFTAEV ENLRVMRESN TVQVPEYILH GTSKTHAYLV LNYLATKPLD DAERSYEFGV QLANLHRWGE QKEFGFDIDN YIGATVQPNP WHKKWALFFA EQRIGWQLQL MQEKGVNLTN INEFVEMVKT RLANHSPRPS LLHGDLWFGN VANIVNGPLC FDPACYWGDR ECDIALAEWF GGFQPEFFQG YESVWPLDWG YEERKDIYNL YHVLNHYNQF GGHYLDEAQK LIEKILSY
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