| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1129 |
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| Symbol | |
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| ID | 5137678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1190417 |
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| End bp | 1191871 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532587 |
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| Product | sigma-54 dependent response regulator |
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| Protein accession | YP_001217075 |
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| Protein GI | 147675634 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACCAG TTTTGGATCT CAATCAAACC CATTTATATC AAGCCTTCTC TGTTTTACTT
GTTGATGACG AAGTCGGTAT GCAACTGGTA CTGAAAAAAG CGCTGAGTAA ATGGTTTTCG
CGCGTCGATT TAGCCAGCAG CATTGAAGAG GCCGAGGTGC TGCGTGGTGA GCATCACTAC
GACTTGCTGA TTTTAGACAT CAACCTACCG GGACGCTCAG GGATTGAATG GGAAGAAGCG
TTTACCGATC CGGATCACCG CGCGGATGTG ATTTTTATGA CCGGATTCGC GGATCTTGAG
ACCGCCATCA GCGCTCTCAA ACTGGGGGCA AGCGATTTTA TCCTCAAGCC ATTTAACCTC
GAACAAATGC TGCAAGCGGT GCAACGCTGT ATGAATAAGC GCCTCAATGA GCGTTTGCAG
TACGCCTTGC AGCGTGATTT TCAACGCCAC TGCACAACAC AAATCATCGG CAGTTCAGTG
CAAACCGAAT TACTCAAGCA GCGCATTGTT CAATTTGCTC CGTCGCGCGC TTCGGTGCTG
ATTGAAGGGG AATCGGGGAC GGGCAAAGAG TTGGTCGCAC GCGGCATCCA TGAAGCGAGT
GGTCGCCAAG GTCCTTTTGT GCCAATCAAC TGCGGCGCGA TTGCGCCAGA ACTGCTGGAA
AGTGAACTGT TTGGGCACAC CTCTGGGGCA TTTACCGGCG CGAAGAAGAG TCGTGAAGGG
CTGTTTCGCG TGGCTAACGG CGGCACTCTG TTTTTGGATG AAATCGGCGA AATGCCACTG
ACCATGCAAG CCTCGCTATT ACGGGTTTTA GAACAACGCG CGGTGCGCCC AGTGGGTTCG
GAAAAAGAGG TGAATGTGGA CGTGCGAGTG GTGGCCGCCA CCAACCGTAA TCTGCAACAA
GAAGTCGAAA ATGGCCGTTT CCGCGGCGAT CTTTACTACC GGCTTAATGT GTTGAAAATC
GAAGTGAGCC CACTGCGTGA GCGCAAGCAA GATCTGCATG AACTGTTGCC GTTTTTCACC
AAAATGCTCT GTGCGGAACT GGGGATGCCA ATGCCTAAAT GGGCGTATGA AGATATCTCT
TCGATGCAAG ACTATGATTG GCCGGGCAAT ATTCGCGAGT TGAAAAACTT AATTGAGCGC
TGCTTGTTAT TGGGCAAACC GCCTGCGCAT TATTGGCGAG AGCTCAATGG TCTGCCTATT
TATGCAGAAC CCGAGGTGAC AATGTCACAG AGTAATAATT CTGAAATTTC ACTTGGTGAC
AATGTCACGC AGCCCAGCTT GGGATATCCC AACGATTGGC CTCTGAGTGC GGTGGAAAAA
GCACATATTC AGCAAATTGT GGCGCTGCAT GAGGGCAATA AATCGGCCGC CGCCCGCGAT
TTAGGCGTGG CACGTAAAAC GTTGGAGCGT AAATACAAAG AGTGGGAAAG CGAGGATCTC
AGCCATGAAA GCTAA
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| Protein sequence | MSPVLDLNQT HLYQAFSVLL VDDEVGMQLV LKKALSKWFS RVDLASSIEE AEVLRGEHHY
DLLILDINLP GRSGIEWEEA FTDPDHRADV IFMTGFADLE TAISALKLGA SDFILKPFNL
EQMLQAVQRC MNKRLNERLQ YALQRDFQRH CTTQIIGSSV QTELLKQRIV QFAPSRASVL
IEGESGTGKE LVARGIHEAS GRQGPFVPIN CGAIAPELLE SELFGHTSGA FTGAKKSREG
LFRVANGGTL FLDEIGEMPL TMQASLLRVL EQRAVRPVGS EKEVNVDVRV VAATNRNLQQ
EVENGRFRGD LYYRLNVLKI EVSPLRERKQ DLHELLPFFT KMLCAELGMP MPKWAYEDIS
SMQDYDWPGN IRELKNLIER CLLLGKPPAH YWRELNGLPI YAEPEVTMSQ SNNSEISLGD
NVTQPSLGYP NDWPLSAVEK AHIQQIVALH EGNKSAAARD LGVARKTLER KYKEWESEDL
SHES
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