Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1128 |
Symbol | |
ID | 5136067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1188394 |
End bp | 1190427 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640532586 |
Product | sensor histidine kinase |
Protein accession | YP_001217074 |
Protein GI | 147673472 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTA AATGGGCTTG GTGGCAAAAA TGGCGACACC GTTTTCAAAC CACCGTGCGC TATCGGCTGT GGATTCTGAC CTCAGCGCCA ATTTTTCTCA CACTGCTGGC GCTGATTGCG ATCACCATTT ACTGGTCACT GCATTACACC TGGAACAGTG CTTTAATTGA TGTGTCTGAG CGGTTAGGCG TGGCGCAAAA CAGTGTAACT CTACTGCAAC AGAAACAAGC CAATCACGTT CGCGCGTTTG CAGAATCGTA CGATTTTCGC AAGCGTCTGC AAGAGCCGGA AACCCTCAGT ACTTTGCCAC GTTGGGTGCA AAATCAAAAA AATCGCTATG GCTTAGATTT CTTAAGTTTT GAGCGTGTGG ATAGCTTAGA GCAGAAGTTT CGCTATCTCG ATCTCACCAA GCGTGAATCC TTCTTTGATG TACTTAGTGC CGATGAGCTA GAAAAGCTCG ATCCGGATTT AGCTAAGCAA GCGCAAATCC CGATTCTTAA TTCTCAACAG ATCGAAACTC GGGGATTAGT CAGTCGTACC GTGATTCCAG TGCGCAATGA CTTCGGTGAG ATCATAGGTT TTTTGGATGG TGGTTTACTG CTCAATAACA GCACAACCTT AGTCGATCAA ATTCGAGATC TCATCTACCC AAGTCATCAA GATCAGCTTC GCCCAACGGG CACTTTAACC CTGTTTTTGG ATGACTTACG CGTCAGCACC AACGTGCCTT TAGACAGTAA TATCCATGCA GGTCGCGCGA TAGGCACACG GGTGTCATCC GAAGTGTTTA ATCAAGTGCT CAAAGGTGGT CAGCAGTGGG TTAATCTGGC GTATGTGTAT GATGCTTGGT ACATCACCGC GTATGAGCCG ATTCGCGATC AATACCACAA CGAAATTGGC ATGCTGTACA CCGGCTACTT AATGTGGCCG TTTTTAAAAG CTTACGTGAC CAATATTTTA GAAGTCGGGA TCATCACGCT TTTCCTGCTG GTGATTTCAG GCCTGTTTGT GTACCGTGGC TCGCGCGATC TGTTTCGTCC TATCGAGCGC ATTCACCGTG TAGTGAAAAT GGTGCAACTT GGTAAAAACC AGCGTATTGG TCAAATTGGG CTTGATGACA AACATGAACT CGCTCAGCTT GCGAAGCAAT TCGACAACAT GCTGGATCAG TTGCAGCAAC GGAATGAAGA AATCGTGCAA GCCGCGCATG AGTTAGAAGC AAAAGTGCAA TCGCGCACCG CCAGTTTGCA AGAGAAAACC GCGCAGCTTG AGCACCACAT TGCCTTGCTT AACCAAACGC GCAATAAGTT AGTGGTGCAT GAAAAACTGG CGGCACTTGG TGAGCTAACC GCGGGGATTG CCCATGAAAT CAATAACCCT ACCGCCGTGA TTCTCGGTAA TACCGAGTTA ATTCGTTTTG AGCTTGGTGC TGATGCGAGC AGAGTCGAAG AAGAAATTGA TGCCATCTTG CTGCAAATCG AGCGGATCCG AAACATCACG CGCAGCTTGT TGCAATACAG TCGCCAAGGC GGAGTGCAGG ACGAAATCAC GTGGCAACAC GTCAATCCGA TCATTGATGA GAGTATTACC TTAGTCAAAA CTGGTTCGAA AAAGCGCGAT ATTGAATTTG TGCTGGAACT GAAAGCGCAC AATTCGGTGG AGGTGAATCG CCATCAACTG CTGCAAATTC TGGTTAACCT ACAGATGAAC GCGATTCATG CCATGAACGG CAAAGGCCGC ATCACGATAC GTAGCGAAGA TTGGGTTGAA GAGGGGCAAA ACCGCGGAGC GGTGATCCAC ATTGAAGATC AAGGTTGTGG CATTAAGCCA GAAAACCTCA AACGTATTTT CGATCCGTTT TATACCACCA AACGTGAGGG GACAGGGCTT GGGCTTTCGG TTTCACAAAG TTTGCTTAGC CAGTCTGGCG GAGAAATTAA AGTGCAGTCT GAATTGGGCG TGGGTAGCAC TTTCAGTATC TTCCTGCCTT CCAAAAATGA AGCGAAACTT CGCGAGACCT TGCTGCTTCA ATAA
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Protein sequence | MKAKWAWWQK WRHRFQTTVR YRLWILTSAP IFLTLLALIA ITIYWSLHYT WNSALIDVSE RLGVAQNSVT LLQQKQANHV RAFAESYDFR KRLQEPETLS TLPRWVQNQK NRYGLDFLSF ERVDSLEQKF RYLDLTKRES FFDVLSADEL EKLDPDLAKQ AQIPILNSQQ IETRGLVSRT VIPVRNDFGE IIGFLDGGLL LNNSTTLVDQ IRDLIYPSHQ DQLRPTGTLT LFLDDLRVST NVPLDSNIHA GRAIGTRVSS EVFNQVLKGG QQWVNLAYVY DAWYITAYEP IRDQYHNEIG MLYTGYLMWP FLKAYVTNIL EVGIITLFLL VISGLFVYRG SRDLFRPIER IHRVVKMVQL GKNQRIGQIG LDDKHELAQL AKQFDNMLDQ LQQRNEEIVQ AAHELEAKVQ SRTASLQEKT AQLEHHIALL NQTRNKLVVH EKLAALGELT AGIAHEINNP TAVILGNTEL IRFELGADAS RVEEEIDAIL LQIERIRNIT RSLLQYSRQG GVQDEITWQH VNPIIDESIT LVKTGSKKRD IEFVLELKAH NSVEVNRHQL LQILVNLQMN AIHAMNGKGR ITIRSEDWVE EGQNRGAVIH IEDQGCGIKP ENLKRIFDPF YTTKREGTGL GLSVSQSLLS QSGGEIKVQS ELGVGSTFSI FLPSKNEAKL RETLLLQ
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