Gene VC0395_A1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1115 
Symbol 
ID5136825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1175062 
End bp1175544 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content47% 
IMG OID640532573 
Productputative nucleotide-binding protein 
Protein accessionYP_001217061 
Protein GI147674648 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCTT TTGATATTGT TTCAGAAATT GATGCGGTTG AGCTGCGTAA CGCAGTCGAA 
AACTCAACGC GTGAACTCGC TAGCCGATTT GATTTTCGTA ACGTAGATGC GAGCTTTGAG
CTGAAAGAAG AGACCGTAAA ACTGGCCGCC GAAGATGATT TCCAACTCGG TCAGATGATG
GATATTTTGC GCGGTAATCT CGCCAAACGC GGTGTGGATG CTCGTGCGAT GAAAGCCAAG
GATTCTGTGC ATATCGGTAA AAACTGGTAC AAAGAAGCAG AATTCAAGCA AGGTTTAGAA
GCGCTACTGG CGAAGAAAAT CGTCAAACTG ATCAAAGATG CCAAAATCAA AGTGCAAGCT
TCGATCCAAG GCGACAAAGT ACGCGTCACG GGCAAAAAGC GCGATGATTT GCAAGAAGTG
ATGGCGATGC TGCGCGAGGC CAACCTTGAG CAACCGCTGC AATACAATAA CTTCCGCGAA
TAG
 
Protein sequence
MPSFDIVSEI DAVELRNAVE NSTRELASRF DFRNVDASFE LKEETVKLAA EDDFQLGQMM 
DILRGNLAKR GVDARAMKAK DSVHIGKNWY KEAEFKQGLE ALLAKKIVKL IKDAKIKVQA
SIQGDKVRVT GKKRDDLQEV MAMLREANLE QPLQYNNFRE