Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1115 |
Symbol | |
ID | 5136825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1175062 |
End bp | 1175544 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640532573 |
Product | putative nucleotide-binding protein |
Protein accession | YP_001217061 |
Protein GI | 147674648 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTCTT TTGATATTGT TTCAGAAATT GATGCGGTTG AGCTGCGTAA CGCAGTCGAA AACTCAACGC GTGAACTCGC TAGCCGATTT GATTTTCGTA ACGTAGATGC GAGCTTTGAG CTGAAAGAAG AGACCGTAAA ACTGGCCGCC GAAGATGATT TCCAACTCGG TCAGATGATG GATATTTTGC GCGGTAATCT CGCCAAACGC GGTGTGGATG CTCGTGCGAT GAAAGCCAAG GATTCTGTGC ATATCGGTAA AAACTGGTAC AAAGAAGCAG AATTCAAGCA AGGTTTAGAA GCGCTACTGG CGAAGAAAAT CGTCAAACTG ATCAAAGATG CCAAAATCAA AGTGCAAGCT TCGATCCAAG GCGACAAAGT ACGCGTCACG GGCAAAAAGC GCGATGATTT GCAAGAAGTG ATGGCGATGC TGCGCGAGGC CAACCTTGAG CAACCGCTGC AATACAATAA CTTCCGCGAA TAG
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Protein sequence | MPSFDIVSEI DAVELRNAVE NSTRELASRF DFRNVDASFE LKEETVKLAA EDDFQLGQMM DILRGNLAKR GVDARAMKAK DSVHIGKNWY KEAEFKQGLE ALLAKKIVKL IKDAKIKVQA SIQGDKVRVT GKKRDDLQEV MAMLREANLE QPLQYNNFRE
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