| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1109 |
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| Symbol | |
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| ID | 5137347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1166597 |
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| End bp | 1169236 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532567 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217055 |
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| Protein GI | 147674478 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.281833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAG AAAATACAAC GCAAACGTCA TACACACCGG AAATCCGCAA ACGTCGGGGC
ATCTCTCCGT TGTGGATCTT ACCCATAGTG ACCATGATTT TAGCGGGTTG GCTGGTGTTT
AAAGCGGTGC ATGATGCTGG AGTGCGGATT CAAATTCATT TTGAAAACGC GCAAGGCTTA
ATCGCAGGTC GAACCACCAT TCGCTATCAA GGATTGGAAG TGGGGATGGT GCGCGACATC
AAACTCTCTG AAGGATTGGA TAGCATCTAC GTCGAGGCGG ATATTTATCC TGAAGCCACT
AAGCTTCTCT CCAATCAAAC GCGTTTTTGG ATGGTCAAAC CGACGGCGAG TTTATCCGGC
GTTTCTGGGC TAGATGCGCT TGTATCAGGA AACTATATTG CGATCCAACC GGGTTCAACG
CATCAAGAGG ATTATCCAAC ACAATATCAA GCACTGGACT CAGCCCCCTC GGATCTACTG
GCACAACGCG GCTTGACCAT TTCTCTCAAA GCTCGCGATT TAGGTGGCAT CTCGGTCGGC
TCGCAGATTG TGTATAAAAA AATCCCGATT GGTGAAGTGT TTAGCTATCA GTTGGATGAT
GATGCGCAGT CGGTGATTAT CCAAGCCTCG ATCAAAGAGG AGTACCAACA CATCATTAAT
ACGGAAAGCC GCTTTTGGAA CGTGAGTGGT ATTGGTGCCA GTATCGGCTT TGAAGGGGTC
GATGTTCGTC TAGAAAGCTT AAGCGCGCTG ATTGGCGGCT CGATTGCGGT CGACTCACCT
GATGAAGGCA AACCCGTAGA GCAAAATGCG CAGTTTCGTC TGTATCGCGA TTTAAAAACC
GCGGGGCGCG GTATTGCGGT ATCGATCACT TTACCGGATG ACAACAACAT CTCAGCGTCC
GGCGCCCCCA TCATGTATCG TGGTATTGAG ATTGGCCAAA TTACCGATTT ACAGCTAACC
GAAAACCGCA AAAGTATCGT GGCCTCTGCT GCGATTCAGC CTGCGTTTAG CGATATGCTG
AATCAGGGCA GCCAGTTTGT TCTTGAAGAA GCACAAGTCT CTTTAACTGG GGTAGAAAAC
CTGACCAATC TTGTGAAGGG TAACTACCTC ACCCTGATCC CCGGAGCCGG AGAGCGCACG
CGTAACTTTC AGGCCGTACG CAAAAATGAA TTTAAGTATG CGCGCTCCAA CAGCATCAGT
TTCAATCTTG TGGCAGATAA CTCATTTGGT TTAGAAGCGG GAACCCCGAT TTTGTATCGC
GGCGTGGCCG TAGGTAGCGT TACTGCCGTG AATCTTAAAC TCGATTATGT TGAGTTTAAC
GTATTGATTG ATGAGCAATA TGGCGCGTTG ATCCGCTCCC AAAACCGTTT CTACGTCACT
GGAAGTGCAG CGGCTGAGCT TACGGAATCG GGACTTTCTG TTTCTATTCC ACCTGCGAAA
CAACTGTTGC TTGGGTCGAT CAGTTTTGCC AGTGAAGGCA GTAGCACACC GCTTGAACAG
TATCGACTCT ACTCGAGTCA GTCTCTGGCT GAATTGGCGA AATACAATCA GTCAGGCTCT
CGTTCATTAA CGCTGTTTGC TCATGAGCTG CCTTCAATCA ATGCTGGCTC TCCCCTTTTG
TATCGCAATT TGAAAGTCGG CAGTATCTCG GGCTTTACTC TTACGCCTAA AGGCGTGCAG
ATTGAAGCGA CCATCGAAAA GCAGTATCAG CATTTATTGA CACCAGATAC GGTCTTTTGG
AACCGCTCTG GCGTAGAAAT CAAAGCGTCG ATGGATGGCG TAGATGTAAA AGCCGCACCA
TTACAAACTC TGATCCGTGG TGGCATCGCC TTTGATAATC TGCCCGGAAT TGAAAACAAA
GTCGGTTCGA TGTGGAAACT CTACAGCGAC TATGATCATG CACGTCGCTA TGGTGAGAAA
ATCACGCTGA CCGCACTTGG CACATTGGGA GTCAAAGTGG GCACGCCAGT GCAATACCAA
GGCGTACAAA TTGGCGAGGT ATTTGAAATC ATTCCTGATT TTGAATCGGA TTTCGTCAAA
CTCGCCGCGC GTATCGAGCC ACAATACGCC CCGAAAATTG CCAAGCAGAA TTCACAATTC
TGGCTTTCGC AAGCCAAAAT TGGCCTAAGC GGTATTGAAA ACGTGCAGAA CCTGTTGGGA
CAAAGCATTG AAGTACAACC TGGCAATGGT GAAAGTCGTT TTGAGTTTGA ACTGCACAAA
GAGGCGCGCC ATGGTGGTGC TGGCAATACT TACACTTTGC AGAGTGAAAA ACGCGGCTCG
GTGAGTGTGG GCACCCCGAT TCTGTATCGT GATATTGAAG TGGGCAAAGT GATTGATGTA
CGTTTAGGTG AATTTGCCGA CCGCGTGATC ACCACCATTC GTATAGCTCC GCAGTACACC
TATTTGCTGC GTCAAAACAG CGTATTCTGG AATGTCTCTG GGCTCGATAT GTCGATTGGT
ATTACTGGTG CGAATGTGAA AGCCGGTACT TTTGACAGCA TGTTGCGCGG CGGGATCACC
TTCGCGACGC CAGAGCAGAA ACAGCTAACG CCGGCGGCGC CTGAAGGGCA TACTTTCTAC
CTCTACCCTC AAGCCCAAGA GGAATGGACC AAGTGGCGCA CACCGATCCC TAAGCCTTAG
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| Protein sequence | MSQENTTQTS YTPEIRKRRG ISPLWILPIV TMILAGWLVF KAVHDAGVRI QIHFENAQGL
IAGRTTIRYQ GLEVGMVRDI KLSEGLDSIY VEADIYPEAT KLLSNQTRFW MVKPTASLSG
VSGLDALVSG NYIAIQPGST HQEDYPTQYQ ALDSAPSDLL AQRGLTISLK ARDLGGISVG
SQIVYKKIPI GEVFSYQLDD DAQSVIIQAS IKEEYQHIIN TESRFWNVSG IGASIGFEGV
DVRLESLSAL IGGSIAVDSP DEGKPVEQNA QFRLYRDLKT AGRGIAVSIT LPDDNNISAS
GAPIMYRGIE IGQITDLQLT ENRKSIVASA AIQPAFSDML NQGSQFVLEE AQVSLTGVEN
LTNLVKGNYL TLIPGAGERT RNFQAVRKNE FKYARSNSIS FNLVADNSFG LEAGTPILYR
GVAVGSVTAV NLKLDYVEFN VLIDEQYGAL IRSQNRFYVT GSAAAELTES GLSVSIPPAK
QLLLGSISFA SEGSSTPLEQ YRLYSSQSLA ELAKYNQSGS RSLTLFAHEL PSINAGSPLL
YRNLKVGSIS GFTLTPKGVQ IEATIEKQYQ HLLTPDTVFW NRSGVEIKAS MDGVDVKAAP
LQTLIRGGIA FDNLPGIENK VGSMWKLYSD YDHARRYGEK ITLTALGTLG VKVGTPVQYQ
GVQIGEVFEI IPDFESDFVK LAARIEPQYA PKIAKQNSQF WLSQAKIGLS GIENVQNLLG
QSIEVQPGNG ESRFEFELHK EARHGGAGNT YTLQSEKRGS VSVGTPILYR DIEVGKVIDV
RLGEFADRVI TTIRIAPQYT YLLRQNSVFW NVSGLDMSIG ITGANVKAGT FDSMLRGGIT
FATPEQKQLT PAAPEGHTFY LYPQAQEEWT KWRTPIPKP
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