| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1107 |
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| Symbol | |
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| ID | 5137026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1163462 |
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| End bp | 1165294 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532565 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_001217053 |
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| Protein GI | 147674056 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000586381 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCA CTAAAATAGG ATGCATTCTC ATTAATATGA CGTATTTCAA CGACACTATT
AGCCGCTCTT GGCTGATAAC TCAAGTAAAA AAACATCGCG CCAAACTGTT GTTTGCTAAC
TTTATTGCCG TCGTCGCGAC GCTAATCAGT GTTCCTATCC CACTGCTCAT GCCGTTAATG
GTGGATGAAG TGCTGCTCAA TCATCCGGCA AAAGGTGTGG AGGTGATGAA CCAGTTCCTG
CCACAAGGGT GGCAGACCGC AACGGGTTAC ATCATGCTGA CTTTGCTGAT GGTGGTGGTG
ATGCGTATTG CCAGTCAGTT GTTGAATATC CTACAAAGTC GTCAGTTTAC TTTGGTTTCC
AAAACCATCA CTTACGAAAT GCGCCGTAAG ATGATTGAAA AGCTGGGGCG GCTCAGTATT
CGTCAGTATG AAACGCGCGG CAGTGGCGGG ATTAACGCTC ACCTCATCAC AGATATTGAA
ACCATCGACC AGTTTATTGG CTCTACACTG AGTAAGTTTT TGATTTCTTT GCTTACTGTG
ATTGGTACCG CCATTGTATT GCTTTGGTTG GAGTGGCGAC TTGGCCTGTT TATTCTGTTA
GTGAACCCGA TTGTTATCTA CTTTTCTCGG ATGCTAGGCA GCCAAGTTAA ACATTTGAAA
AAACGCGAAA ACCAAGCGTT TGAGCGTTTT CAAAACCGCT TAGTGGAAAC GTTAGATGGT
ATCTATCAGT TGCGTGCCGC AAACAAGGAG CGCGAGTTCC TCAACCGCCT CATCAGCGAT
GCGGACGCAG TACGCGAAAA TGCTGACAAA TACGCATGGC AATCTGAAGC CGCTGGTCGC
CTCTCCTTCT TACTGTTTTT ACTCGGTTTT GAGCTGTTTC GTGCCGTAGC CATGTTAATG
GTGGTGTTCA GTGACCTTAC CATAGGCCAG ATTTTCGCGG TGTTTGGCTA CTTGTGGTTT
ATGCTCAGCC CGGTGCAAGA GCTGTTGGGT ATCCAGTTTT CTTGGTATGC CGCTAAGGCC
GCTTTGAAAA GAATCAATAG CTTATTAGAG CTAGAAGAAG AGTACCGACC CATCAGCAAA
GTCAATCCCT TTACTCAGCC GGGAGAAGTC GATATTGAGA TCAACAATAT CCATTTCTCC
TACGATGGTG AAAGCCAAGT CCTGAATGAT TTGTCACTTC ATATCCCAGC GGGGAAAAAG
GTGGCGTTAG TCGGAGCCAG TGGCGGAGGG AAATCGACGC TGATTCAGCT CTTAATTGGC
GTTTATCGCG CGCAAAGTGG CGCAATCCGC TTTAATGGAC AACACTGTGA TGACATTAGC
TTTGACGTGA TTCGCGATCA AATTGCCGTT GTTTTACAAC AACCTATACT GTTTAATGAC
ACTTTGCGGC ATAATCTGAC CCTTGGTGGT CAATTTAGCG ATGATGTCTT GTGGCAAGCG
TTGGACATCG CCCAACTGCA AGATGTGATC ACCAAACTCG ACCAAGGGTT AGAGAGCCAA
ATTGGTCGTA ATGGCATTCG ATTGTCAGGC GGACAAAGAC AGCGGCTAGC GATTGCGCGT
ATGGTGCTGA GTAATCCAAA ATTCGTTATT TTGGATGAAG CCACTTCCGC CTTGGATACG
GCTACTGAAG CCGCATTGCA CCTTGCGTTG TCAAAGTTTT TGCATGGTCG AACTACCTTG
ATTGTTGCCC ATCGCCTCTC AGCGGTGAAA CAAGCGGACT TAATTTATGT ATTGGAAGAT
GGACATGTCA GCCAGTCAGG AACTCACCAC GAGTTACTCG AACAAGAAGG CTTGTACCAA
ACCCTTTATG GGAGTGTTCA GTCGCAGCAC TAA
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| Protein sequence | MRITKIGCIL INMTYFNDTI SRSWLITQVK KHRAKLLFAN FIAVVATLIS VPIPLLMPLM
VDEVLLNHPA KGVEVMNQFL PQGWQTATGY IMLTLLMVVV MRIASQLLNI LQSRQFTLVS
KTITYEMRRK MIEKLGRLSI RQYETRGSGG INAHLITDIE TIDQFIGSTL SKFLISLLTV
IGTAIVLLWL EWRLGLFILL VNPIVIYFSR MLGSQVKHLK KRENQAFERF QNRLVETLDG
IYQLRAANKE REFLNRLISD ADAVRENADK YAWQSEAAGR LSFLLFLLGF ELFRAVAMLM
VVFSDLTIGQ IFAVFGYLWF MLSPVQELLG IQFSWYAAKA ALKRINSLLE LEEEYRPISK
VNPFTQPGEV DIEINNIHFS YDGESQVLND LSLHIPAGKK VALVGASGGG KSTLIQLLIG
VYRAQSGAIR FNGQHCDDIS FDVIRDQIAV VLQQPILFND TLRHNLTLGG QFSDDVLWQA
LDIAQLQDVI TKLDQGLESQ IGRNGIRLSG GQRQRLAIAR MVLSNPKFVI LDEATSALDT
ATEAALHLAL SKFLHGRTTL IVAHRLSAVK QADLIYVLED GHVSQSGTHH ELLEQEGLYQ
TLYGSVQSQH
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