| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1105 |
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| Symbol | |
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| ID | 5136670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1162212 |
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| End bp | 1162838 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532563 |
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| Product | putative solute/DNA competence effector |
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| Protein accession | YP_001217051 |
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| Protein GI | 147674881 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000000947436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACA CTGAAAAGTT AAAAAACAGC AAAGAAGTGA TCGCGTACAT TGCTGAATGT
TTCCCTAACT GCTTTACTTT AGAAGGTGAA GCAAAGCCTC TGAAAATTGG TATTTTTCAG
GATCTTGCTG ATCGCTTGAA TGACGACCCT AAAGTAAGCA AAACTCAGCT TCGTGCCGCG
TTAAGACAAT ACACCTCTTC TTGGCGTTAT TTACATGGTG TAAAACCTGG CGCAACTCGT
GTTGATTTGG ACGGAAACCC TTGTGGTGAG CTGGAAGAAC AGCACGTAGA ACACGCACAA
GCGGCACTGG CGGAGAGCAA AGCTCGCGTA GAAGCTCGTC GTAAAGAACA AGTAAAGAAA
GTGCGTGAAG AAGCGAAAGC GAACAAGCCA AAGGCGAAAA AGCCACAGCA AGCTCGCCGT
CCGCAAAACG CACCGAAAGT GGAGAAAAAG CCTGTAGAAA CTCGCGCACT GGCTGCGTCT
GAGCTTAACG TTGGCAATCA AGTCAATGTG AATATGGGTA AAGGCAACAT GGCTGCGACC
ATCGTTGAAG TCAATAAGGA AGATGTGCGT GTTCAACTTG CCAACGGCCT ACAAATGGTT
GTGAAAGCGG AGCACTTGCG CGCATAA
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| Protein sequence | MENTEKLKNS KEVIAYIAEC FPNCFTLEGE AKPLKIGIFQ DLADRLNDDP KVSKTQLRAA
LRQYTSSWRY LHGVKPGATR VDLDGNPCGE LEEQHVEHAQ AALAESKARV EARRKEQVKK
VREEAKANKP KAKKPQQARR PQNAPKVEKK PVETRALAAS ELNVGNQVNV NMGKGNMAAT
IVEVNKEDVR VQLANGLQMV VKAEHLRA
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