| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1098 |
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| Symbol | pyrD |
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| ID | 5137343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1150183 |
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| End bp | 1151193 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532556 |
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| Product | dihydroorotate dehydrogenase 2 |
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| Protein accession | YP_001217044 |
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| Protein GI | 147675557 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.730125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTACC GCTTAGCCAG AGCTGGCTTT TTCCAATTGG ATGCCGAAAA GGCACACGAT
CTGGCCATCT CTAATTTCAA ACGTTTCACT GGCACTCCTT TCGATCTCTT CTATCGTCAA
CAACTTCCTC ATCGTCCAGT TCAATGCATG GGCTTAACCT TTAAAAATCC AGTCGGTTTA
GCAGCAGGGC TCGACAAAAA CGGCGAGTGC ATCGAAGCGT TTGGCGCGAT GGGCTTCGGA
TTTGTTGAAG TAGGCACGGT CACACCAAGA CCACAAGCAG GTAACGACAA ACCACGCCTG
TTTCGTTTAG TGCATGCTGA AGGCATCATC AATCGAATGG GCTTTAACAA TCTGGGTGTT
GATCACTTGG TTGAGAATGT TAAGCGAGCC AAATACGATG GGATCATCGG GATCAACATC
GGTAAAAACA AAGATACTCC GATTGAGAAA GGGGCAGAGG ACTATTTGAT CTGTATGGAT
AAAGTTTATC CTTACGCAGG TTACATCGCC GTAAATATCT CTTCTCCGAA CACACCAGGA
CTTCGTTCTC TACAATACGG TGAAGCGCTG GATGAACTGC TTGCTGCATT GAAAACTCGC
CAAGCTGAAT TAGCAGCGAA ACATGATAAA TATGTCCCGC TTGCACTTAA GATTGCACCA
GATTTAAGTG ACGATGAAAT TCAGCAAATC TGCCAATCAC TTTTGAAAAA CAAAATCGAT
AGTGTCATCG CGACAAACAC CACCTTAGAT CGTTCATTGG TTGAAGGGAT GAAGTTTGCC
AACGAAGCTG GCGGCCTCAG TGGACGACCT TTGCAAAACC GCAGTACAGA AGTTATTAAG
TGTCTGTATA AAGAACTCGG TGAAGAAATT CCGATCATCG GGGTCGGTGG TATCGATTCC
TACATCTCCG CCAAAGAAAA GCTCTTAGCA GGAGCAAAAT TAGTTCAGGT CTATAGCGGC
TTTATTTATC AAGGACCAGG GCTGGTCGCC GATATCGTCA AGAACCTGTA A
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| Protein sequence | MLYRLARAGF FQLDAEKAHD LAISNFKRFT GTPFDLFYRQ QLPHRPVQCM GLTFKNPVGL
AAGLDKNGEC IEAFGAMGFG FVEVGTVTPR PQAGNDKPRL FRLVHAEGII NRMGFNNLGV
DHLVENVKRA KYDGIIGINI GKNKDTPIEK GAEDYLICMD KVYPYAGYIA VNISSPNTPG
LRSLQYGEAL DELLAALKTR QAELAAKHDK YVPLALKIAP DLSDDEIQQI CQSLLKNKID
SVIATNTTLD RSLVEGMKFA NEAGGLSGRP LQNRSTEVIK CLYKELGEEI PIIGVGGIDS
YISAKEKLLA GAKLVQVYSG FIYQGPGLVA DIVKNL
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