Gene VC0395_A1097 details

Gene Information

• Locus tag: VC0395_A1097
• ID: 5136788
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 1149486
• End bp: 1150028
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640532555
• Product: hypothetical protein
• Protein accession: YP_001217043
• Protein GI: 147674895

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.183641
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAAAC CAAGTGACAA ATGGAGTTGG TACTTCTCAG ATAGCGAAGG TTATCTGATG 
CTCAACCTTG GTGATGATAT GCTGTTTCGT ACCAATCTCA GTCGCAATCT TTTGGTGGAT 
TGTGCATTCA TCGAGAACCC CTTCACCGTA GATGACGCTT CTGATTTTCA GTTGTACAAA 
GAACACATTG CCTGTCTACC TCTGAGTGAG CCTCGTAAAG CGGAGTTGGC GCTGTACTGT 
GTGGCCGCAA AACGCTTCCA CAAACCCGTA CAGCCTAAAA GCTGGTTTTT TGATGTACAG 
GGAACCGGTT ATACCCCACA ACAAGGTCAG CTGATATCTC TACGAAACTC CCTTAACAGC 
GGTATTTTTA TTGCGTTAGA AGTGGGGGAG AACGCCACTC TTTGCGCGTA CAGTGATTTG 
GTTTCTTTTG CTTTAAACGG CAGCAAAACA CTGGAATTTG GTCAAGTGAT TAAAGTGATG 
CACGACAGAA TGTCGGATGT GAATACACTT TTGTATACAC CCCAAATGGC CATGGTCAGT 
TAA 

 

Protein sequence

MLKPSDKWSW YFSDSEGYLM LNLGDDMLFR TNLSRNLLVD CAFIENPFTV DDASDFQLYK 
EHIACLPLSE PRKAELALYC VAAKRFHKPV QPKSWFFDVQ GTGYTPQQGQ LISLRNSLNS 
GIFIALEVGE NATLCAYSDL VSFALNGSKT LEFGQVIKVM HDRMSDVNTL LYTPQMAMVS