| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1095 |
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| Symbol | rlmL |
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| ID | 5137583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1146900 |
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| End bp | 1149026 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640532553 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_001217041 |
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| Protein GI | 147673350 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0184189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGT ATCTAGCGGT GACGTCTAAC GGCCTTGAGA ATCTATTAGT TGAAGAATTA
ACCCAACTGG GTATTAACGA TGCCAAACCC GTTCAGGCCG GGGTTAAATT TAAAGCAACC
AATGAACAGA TCTATCGCTG CTGTCTATGG AGTCGTCTCG CATCAAGATT TGTTCGTATT
GTGGCTGAAT TTAAGTGTCA GAATGACTTA GATCTCTATC TTTCAACAAC TTCAGTCAAC
TGGGTCAACT ATTTCCACAG TTCTAAAAAG CTCGTTGTTG ATTTCAATGG CACGAACCGA
GAAATTCGTA ATAGCCAATA CGGCGCGATG AAAGTCAAAG ACGCCATCGT AGATTGCTTC
ACTAAGAAAA ATCTTCCGCG TCCGTCGATC AGCAAAGATC TTGCGGATCT TCATATCCAT
GTCCGCTTAC ACAAAGAGAA TGCTCTGCTT GGTATCGATA TGGTGGGTTC AGGCTTGCAT
GCTCGGGGCT ACCGAACTGA AGCAGGTAAA GCGCCATTAC GTGAAACATT AGCCGCCGCA
ATCATTCTGC GCAGTGGTTG GGATGCCAGT AAACCGCTTC TCGATCCTAT GTGTGGCTCC
GGTACCTTAC TGATTGAAGC GGCGATGATG GCTGCCAATA TTGCTCCAGG CTTACAACGT
AAAAAGTGGG GCTTCGAAGC ATTAGAAGAT TTCGAACCAG AACTCTGGGC AAGTGTGAAA
TCAGAAGCCA GCGTGCAAGG TAAACGTGGA GTCAAAAAGG TAGAAACTCA TTTCTACGGC
GTAGATAACG ATAACCGCGT ATTGCAGACG GCTAAAGATA ACGCCCGCCG TGCCGGTGTA
GAAGAGCTAA TCAGCTTTAC CTTGGGTGAT GCGGCAAAAG TAAAACGCCC AGAAAACTTC
GCTGAAGGTA TTGTGATTTG TAACCCACCG TACGGTGAGC GTTTAGGCAC TCATCCCGGT
TTGATCGCTC TTTACACTGC ATTTGGTGCA CAGCTTAAAG CTGAGTTTGG TGGTTGCCAC
GCTTCTATTT TCTCGAGTTC TGACGAATTA CTCAGTTGTT TGCGCATGCG TGCGGACAAA
CAGTTCAAGC TGAATAATGG TGCGTTACCA TGTCACCAAA AAAATTACAC CATAGCCATG
CGAGAGCAAA ACAGCGTCAG CAATGAAGGT ACTCAAGAAA TCCTCATTGC CCCCGATTTT
GCCAACCGTT TGAAGAAAAA CTTCAACAAG ATTGGCAAAT GGGCTAAGCG TGAGGGGCTC
GATTGCTTCC GCCTCTATGA TGCGGATCTT CCCGAATACA ATGTGGCTAT TGATGTCTAC
CAAGATCATC TCATGATCCA AGAATATGCA GCGCCAAAGG ATATTCCTGA AGAGAAAGCG
AAGCGTCGTT TGACCGATAT TATTCGCGCA GCCATTCAAG TGTTGGATGT CGATGCGAAC
AACGTCGTGC TCAAAGTTCG TGAAAGACAA AAAGGCACGT CGCAATACGA GAAACTCGGC
CAGCAAGCAC AGACCATGCA AATTACCGAG TATGGCGTGA AGTTGATCGT CAACCTATAC
GATTATCTCG ATACTGGCTT ATTCCTTGAC CACAAAATTA CTCGTCGTCG TTTAGGGCAA
ATGGCACAAG GCAAAGATTT TCTCAATTTA TTTGCCTATA CCGGCTCTGC GACAGTACAT
GCTGCTTGTG GCGGTGCAAA ATCGACGACG ACCGTCGATA TGTCGAAAAC TTATCTTGAA
TGGGCCAAAG AGAACATGCA GTTAAACGGG CAGGTTGGGC GTCAGCACCA GTACGTTCAG
GCCGACTGTC TACAGTGGCT CGCGAATGCC CAAAGCCAGT ACGATCTTAT CTTTATTGAT
CCGCCAACGT TTTCTAACTC TAAACGTATG GAGCAGACTT TTGATGTGCA ACGTGACCAC
GTCACGCTTA TGACCAATCT TAAACGGTTG CTGCGCCCAG AAGGGACGAT TGTTTTCTCT
AATAACAAGC GCCATTTCAA GATGGATATG GAAGCGCTAC ACGCTTTGGG CCTCAACGCT
CAAAATATCT CGCATCAAAC CTTACCGCTG GATTTTGAGC GAAATAAACA AATTCATAAC
TGCTGGCTGA TCACCCATCA GAGTTAG
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| Protein sequence | MNQYLAVTSN GLENLLVEEL TQLGINDAKP VQAGVKFKAT NEQIYRCCLW SRLASRFVRI
VAEFKCQNDL DLYLSTTSVN WVNYFHSSKK LVVDFNGTNR EIRNSQYGAM KVKDAIVDCF
TKKNLPRPSI SKDLADLHIH VRLHKENALL GIDMVGSGLH ARGYRTEAGK APLRETLAAA
IILRSGWDAS KPLLDPMCGS GTLLIEAAMM AANIAPGLQR KKWGFEALED FEPELWASVK
SEASVQGKRG VKKVETHFYG VDNDNRVLQT AKDNARRAGV EELISFTLGD AAKVKRPENF
AEGIVICNPP YGERLGTHPG LIALYTAFGA QLKAEFGGCH ASIFSSSDEL LSCLRMRADK
QFKLNNGALP CHQKNYTIAM REQNSVSNEG TQEILIAPDF ANRLKKNFNK IGKWAKREGL
DCFRLYDADL PEYNVAIDVY QDHLMIQEYA APKDIPEEKA KRRLTDIIRA AIQVLDVDAN
NVVLKVRERQ KGTSQYEKLG QQAQTMQITE YGVKLIVNLY DYLDTGLFLD HKITRRRLGQ
MAQGKDFLNL FAYTGSATVH AACGGAKSTT TVDMSKTYLE WAKENMQLNG QVGRQHQYVQ
ADCLQWLANA QSQYDLIFID PPTFSNSKRM EQTFDVQRDH VTLMTNLKRL LRPEGTIVFS
NNKRHFKMDM EALHALGLNA QNISHQTLPL DFERNKQIHN CWLITHQS
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