| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1093 |
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| Symbol | |
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| ID | 5136104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1144752 |
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| End bp | 1146671 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532551 |
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| Product | ABC transporter ATPase component |
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| Protein accession | YP_001217039 |
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| Protein GI | 147673353 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.140566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAA TTACCATCCA TAACGGTTTG CTGGCCTTTG GCGATCACCC ATTACTGGAT
CACGCTGATT TCGCCTTACA AGAAAATGAA AGAGTGTGTC TGGTTGGGCG TAATGGCGCC
GGAAAATCCA CGCTGATGAA AGTACTCGCA GGCGAGATTC TGCTGGATGA TGGCAAGATG
CAAGTCATGC AAGATGTCGT CGTATCCCGT TTAGAGCAAG ATCCGCCTCG CAATCAAGCG
GGTACTGTAT TTGATTATGT TTCAGGTGGT CTGCAAGGCA TTGGCGAACA ACTCAAGATC
TATCAAGATC AATTAGATCT CGTAGCAACA GATCCAAGCG AATCCAACAT TAATAAGCTT
GCACATATCC AAGAGCAGCT TGAAGTTTCT GGTGCTTGGC GCTTTGAAGA TCGAATCAAA
AATGTGCTGG GTTCCTTAAA ACTAGATGGC CACACCAAAT TAACCGACCT GTCTGGTGGT
TGGCAGCGTA AAGCTGCATT AGCGCGAGCG CTGGCGTGTG ATCCCGATGT CCTGCTTCTT
GATGAACCAA CCAACCACCT CGATGTAACA ACGATTGAAT GGTTAGAAGG TTTTCTGAAA
GATTTCCGAG GTTCTATCAT TTTCATTTCC CATGACCGTG CTTTTATTAA GTCTATGGCA
ACCCGCATTG TGGATCTCGA TCGCGGTCAA CTCAGCTCTT TCCCAGGAGA TTATGAAAAT
TATCTTACTG AAAAAGAAGA GATGCTGCGG GTTGAAGAGC TGCAAAATGC CGAGTTTGAT
AAAAAGCTCG CTCAAGAAGA GGTTTGGATC CGTCAAGGTA TTAAAGCACG AAGAACTCGT
AATGAAGGAC GAGTTCGGGC ACTGAAACGT CTTCGTCAAG AACGTAGTGA GCGTCGTGAA
GTGCAGGGTA AAGTTAACCT GCAAATCGAT GATTCCAATC GCTCAGGGAA AATCGTTTTT
GAAGCCGAAA ATCTTCATTA CTCGATCGGT GGCAAAACCA TTGTTGATGG TTTCAGCTTC
AACATCATGC GCGGTGACCG AATTGCGTTA ATTGGTCCTA ATGGTTGTGG CAAAAGTACC
TTACTCAAAA TTTTGCTGGG TGACTTACAG CCCGATAGCG GCAAAGTACA CTGTGGTACT
AAGCTTGAGG TCGCCTACTT TGATCAATAC CGGGAGTTAC TCGATCCAGA AAAAACCGTT
ATCGATAACT TAGCGGATGG TAAACAAGAA GTGATGGTAG GCGGGCGTCT TCGCCACGCG
TTAAGCTATC TACAGGACTT TTTGTTCTCA CCCAAGCGGG CAAGAACCCC AGTAAAAGCG
TTATCTGGTG GAGAAAAAAA CCGTTTGCTG CTTGCGCGCA TTTTGCTTAA AGCCAACAAC
CTATTAGTGC TTGATGAACC AACCAACGAT TTAGATATCG AAACTTTGGA ACTTTTGGAA
GAATTGCTTG CCAATTACCA AGGCACTTTA TTGCTGGTCA GCCACGATCG TGAATTTGTC
GATAACACCG TCACCTCAAG TTGGATTTTT GAAGGCGACG GCAAGATTGA AGAATTTGTC
GGTGGCTACC ATGACGCTCA GCAACAGCGT GCCCAAGTTT TACAAAGCAG AGCTGCTGAA
AATATCGTCA AAAAAGAAAA AGTGGTTGAG GAGTCTCCCA AATCCGCACC ATCGAAAACT
AAGCAGAAGA AGTTATCTTA TAAACTGCAA CGCGAACTTG AAGCTCTTCC GCAAAGATTA
GAAGAGCTGG AAGTTGAGAT CGCAGCGTTA CAAGACATCG TCAATAGTCC AGACTTTTTC
AGTCAGCCTG TCGATAAAAC GCAACCCATT TTAGACAAGT TAACTGCAAC AGAGCAGGAA
CTCGAAATTG CTTTTGAGCG TTGGGAAGAG CTTGAAGCGA TGCAACAGGA AAGTGAATAG
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| Protein sequence | MALITIHNGL LAFGDHPLLD HADFALQENE RVCLVGRNGA GKSTLMKVLA GEILLDDGKM
QVMQDVVVSR LEQDPPRNQA GTVFDYVSGG LQGIGEQLKI YQDQLDLVAT DPSESNINKL
AHIQEQLEVS GAWRFEDRIK NVLGSLKLDG HTKLTDLSGG WQRKAALARA LACDPDVLLL
DEPTNHLDVT TIEWLEGFLK DFRGSIIFIS HDRAFIKSMA TRIVDLDRGQ LSSFPGDYEN
YLTEKEEMLR VEELQNAEFD KKLAQEEVWI RQGIKARRTR NEGRVRALKR LRQERSERRE
VQGKVNLQID DSNRSGKIVF EAENLHYSIG GKTIVDGFSF NIMRGDRIAL IGPNGCGKST
LLKILLGDLQ PDSGKVHCGT KLEVAYFDQY RELLDPEKTV IDNLADGKQE VMVGGRLRHA
LSYLQDFLFS PKRARTPVKA LSGGEKNRLL LARILLKANN LLVLDEPTND LDIETLELLE
ELLANYQGTL LLVSHDREFV DNTVTSSWIF EGDGKIEEFV GGYHDAQQQR AQVLQSRAAE
NIVKKEKVVE ESPKSAPSKT KQKKLSYKLQ RELEALPQRL EELEVEIAAL QDIVNSPDFF
SQPVDKTQPI LDKLTATEQE LEIAFERWEE LEAMQQESE
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