Gene VC0395_A1091 details

Gene Information

• Locus tag: VC0395_A1091
• Symbol: fabA
• ID: 5135159
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 1142111
• End bp: 1142629
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640532549
• Product: 3-hydroxydecanoyl-(acyl carrier protein) dehydratase
• Protein accession: YP_001217037
• Protein GI: 147674296
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 0.671616
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAACA AACGTGATTC GTATAATCGA GAAGATCTTT TAGCGTCAAG CCAAGGTGAG 
TTGTTTGGTG AGGGCTATCC TCAACTTCCA GCGCCAAATA TGTTGATGAT GGATCGCATT 
ACCAAGATGT CAGAAACTGA AGGTGAATTT GGTAAAGGTT TGATCTTAGC TGAGCTCGAT 
ATCACGCCTG ATTTATGGTT TTTTGATTGC CATTTCCCAG GAGACCCAGT GATGCCGGGA 
TGCTTGGGCT TAGATGCCAT GTGGCAACTG GTGGGTTTTT TCCTTGGCTG GGTTGGCGGT 
AAAGGTAAAG GTCGCGCGCT TGGCGTTGGC GAAGTGAAAT TTACAGGACA AATTTTACCA 
ACAGCTAAAA AAGTCACCTA CGAAATTAAC ATGAAGCGTG TGGTGAACCG TAAGCTAGTG 
ATGGGTTTAG CCGATGGTCG CGTACTTGTT GATGGCAAAG AAATATACGT AGCCAAAGAT 
CTTAAAGTTG GCTTGTTCCA AGATACGTCT GCGTTTTAA 

 

Protein sequence

MQNKRDSYNR EDLLASSQGE LFGEGYPQLP APNMLMMDRI TKMSETEGEF GKGLILAELD 
ITPDLWFFDC HFPGDPVMPG CLGLDAMWQL VGFFLGWVGG KGKGRALGVG EVKFTGQILP 
TAKKVTYEIN MKRVVNRKLV MGLADGRVLV DGKEIYVAKD LKVGLFQDTS AF