| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1055 |
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| Symbol | |
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| ID | 5137266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1100035 |
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| End bp | 1101579 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640532513 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | YP_001217001 |
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| Protein GI | 147674610 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATCGAT ATATTCAGTT TGATGATTTT ATTGTTATTT CCAAAGATAA AAACGGTCAC
CAGTTTCGTA CGGCGATTGC CTCAAATGCC TCATTTAATG ATGTTGTTTG GCCAAACGGA
GTTAAATTTC AGCGTGTGCT GAATGGTGAG TGCATTCTGT TATTTGAACC TTGTAAGTTA
GATGAGTTTG CCTGCTTAAT GGGGTCGATT GATAAGCCGG TTTATTCCGC TTTGATTACT
GGGATTCAAG CTCAAATCAG CGATTCTGTC CTCATCTTAT TAGGGCAGAA TAAAGGTCAG
TTTTCTCTTG AAGCAAAAGA GACGTTGTCA CGTTTTAGGC CGCTGTTAGA AAGAGCTATC
TCAGATATTG AACATAAAGA AGAGTTACAA AAACTCGTAG AAATAAGAAC GCGTGAACTG
CGTTTGGCGC AAAAACTGGC AGAGCAAGCT AACCAATCTA AGTCCAACTT CCTCGCGATG
ATGAGCCATG AGCTCAGAAC TCCGTTGAAT GCGGTGCTTG GATTGATTGA TATTTTACGT
GGAGAGTCAA CGAGTTACCA AGTTGAGCTG CTTGAGCAGA TGGAAAACTC TGCCGAACTT
CTTCTCATTA TTATCAATGA TATTTTAGAT TTAAGCCGAA TCGAGTCTGG GCACTTTTCA
TTACACTGTC ACTGGTTGGA TCTAGAAAAG AAACTAGATC AATCTTTGGT TTATCACAGA
CAGATTGCGC AAGATAAAGG TGTGCATTTT TATGTTCAAT CGAATAAGAA TCCAACATTA
GAGTACTACA CCGATTCGGC AAGGCTCACA CAGATACTTT TTAATATTGT TGGTAACGCC
ATCAAGTTCA CTAAACAAGG TCAAGTTGAT GTAGTATTAG ACTACACCAA GGATGGCGTC
GTATTTCGAG TCAAAGATAC AGGAATTGGG ATTGAAAAGA ATCGGGTAGA ACAATTATTT
ACCCCCTTTA TTCAAGCGGA TAATTCAATT ACAAGAAATT ATGGTGGTAC AGGGTTAGGC
CTTGCGATTA CCAAACATTT GGTTGAATTG ATGGGTGGCA CAATCCAAGT TGAAAGTGAG
TTCGGTATAG GCACAACCTT TACTTTATAT ATTCCACTTC AATCTCGCTT GAAAAATATT
AAACCGAGTA CGTCCTCATC CCAACAAATC GTAAATGTAA AAAATCATCA CATTCTTGTT
GTGGAAGACA CAAAGACCAA TCAAATGGTC ATTCAATTAC TACTGAATAA GTTGGGCTAT
GATGTCACGA TTGCAGAAAA TGGGCTGCAA GCGGTGGAGC TTTTAGAAAA AAATCATGTA
TTTGATCTGG TGCTAATGGA TATTTCCATG CCGATTATGG ATGGTATTGC TGCAACCAAA
ATACTCCGAG ATAAACATAT TGAAATCCCC ATTATCGCAC TCACTGCTCA CACCGCCGGG
AGTGACAAAC AAAACTGTAT TGATGCGGGA ATGAATGACA TTGTACTAAA ACCGATCCGC
AGCAAAGACA TCATGGAGGT TGTGAAACGT TTCCTTAATC CATAG
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| Protein sequence | MNRYIQFDDF IVISKDKNGH QFRTAIASNA SFNDVVWPNG VKFQRVLNGE CILLFEPCKL
DEFACLMGSI DKPVYSALIT GIQAQISDSV LILLGQNKGQ FSLEAKETLS RFRPLLERAI
SDIEHKEELQ KLVEIRTREL RLAQKLAEQA NQSKSNFLAM MSHELRTPLN AVLGLIDILR
GESTSYQVEL LEQMENSAEL LLIIINDILD LSRIESGHFS LHCHWLDLEK KLDQSLVYHR
QIAQDKGVHF YVQSNKNPTL EYYTDSARLT QILFNIVGNA IKFTKQGQVD VVLDYTKDGV
VFRVKDTGIG IEKNRVEQLF TPFIQADNSI TRNYGGTGLG LAITKHLVEL MGGTIQVESE
FGIGTTFTLY IPLQSRLKNI KPSTSSSQQI VNVKNHHILV VEDTKTNQMV IQLLLNKLGY
DVTIAENGLQ AVELLEKNHV FDLVLMDISM PIMDGIAATK ILRDKHIEIP IIALTAHTAG
SDKQNCIDAG MNDIVLKPIR SKDIMEVVKR FLNP
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