| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1052 |
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| Symbol | ccoO |
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| ID | 5137420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1095909 |
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| End bp | 1096529 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532510 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_001216998 |
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| Protein GI | 147673108 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.281252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTCTA ATTCTAATAA TCGCCATGAA CTACTTGAGC GTAATGTCGG CTTACTGGCT
ATTTTCATTG TTTTTGCCAT CAGTTGGGGT GCTCTGGTTG AGATTACCCC ATTGATTTTC
CAAAAACAGA CCACGGAAGA AGTACAGAAC CTCAAACCTT ATACCGCGTT GCAACTCGAA
GGTCGCGACA TTTACATCCG TGAAGGTTGT AACGTTTGTC ACAGCCAGAT GGTGCGCCCA
TTCCGTTCTG AAACCGAGCG TTATGGCCAT TACTCTGTGG CAGGTGAAAG TGTTTGGGAA
CACCCATTTT TATGGGGCTC TAAACGTACT GGTCCTGACT TAGCACGTGT GGGTGGTCGT
TATTCTGATG AATGGCACCG TGTTCACCTA TTGAACCCAC GTGAACTGGT TCCTGAATCA
AATATGCCTG CATTCCCATG GCTGGCAAAA AACACTCTGG ACGGTAAATA CACGCAACAA
AAGATGACCT TGTTCCGTGA CAAGTTTGGT GTTCCGTACA CAGATGAACA AATCGCAAAT
GCGACAAAAG ATGTAGAAGG TAAAACAGAG ATGGATGCCA TCATTGCTTA TCTTCAATCT
CTTGGTCATG CAATGAAATA G
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| Protein sequence | MSSNSNNRHE LLERNVGLLA IFIVFAISWG ALVEITPLIF QKQTTEEVQN LKPYTALQLE
GRDIYIREGC NVCHSQMVRP FRSETERYGH YSVAGESVWE HPFLWGSKRT GPDLARVGGR
YSDEWHRVHL LNPRELVPES NMPAFPWLAK NTLDGKYTQQ KMTLFRDKFG VPYTDEQIAN
ATKDVEGKTE MDAIIAYLQS LGHAMK
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