| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1048 |
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| Symbol | |
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| ID | 5137222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1091813 |
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| End bp | 1094185 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532506 |
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| Product | cation transporter E1-E2 family ATPase |
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| Protein accession | YP_001216994 |
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| Protein GI | 147674112 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.582758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAA CGTGTTATCA CTGCGGTGAG GATGTACCTG CCGGCACAAA TTTCCACGTT
GATATTTTGG GTGAACAACG TGACATGTGC TGCCCCGGCT GCCAAACGGT TGCTCAAACC
ATTGTCGATA GTGGCCTCGT TTCTTACTAC CAATTCCGCA CCGCACCAGC GGAAAAGGTG
GAATTGGTTC CCGAGCAATT GAAAGCTTTG ATTCACTACG ACAATAGTGA TGTCCAAGCC
GAGTTTGTGC GTAGCAAAGA TGACCACTCT GAGGTGACAT TGTCACTCGA TGGTGTTTCA
TGTGCCGCCT GTGCGTGGTT AATTGAAAAA CAGCTACACA CCGAGCCGGG CGTCGTCTCT
ATTCGAGTCA ATACAACAAC CAATCGAGCG CTCCTCAGCT GGGACCGAAC CAAAACCCAG
CTAAGCCATG TATTAGCTCA AATTCATAAA CTGGGTTATA AAGCCGCGCC TTTTGAAGCT
GACAAGCATG AAACGCAATA CCACGATGCC ATGAAAACAT ACTTGTATCG TCTTGGTATC
GCGGGATTGG CGAGCATGCA GGTGATGATG CTGGCTGTCG CACTTTATCT CGAGGCGTTT
GGCGATCTGG ATGCTGAGTT TAAAAACTAT TTCCGCTGGG TGAGCTTAAT TTTTGCTACT
CCTGTCTTAC TCTACTCGGC CCTTCCATTT TACCTAAATG CATGGCGCAG TATTCGTGGT
CGCACTTTAG GCATGGATGT CCCCGTCTCT CTCGCACTCA TCTTTGCTTA TATAGCAAGC
TTAGTCGCAA CCATTACCGA ACAAGGTGAA GTGTTCTTCG AATCGATCTC CATGTTTACC
TTCTTCTTAT TGGTAGGCCG CTTTTTAGAG ATGAGAGCGA GACGTAAGGC GGCTGCCGCA
AGTGGTAACC TGTTGAAACT CATCCCCGCG ATTGCAACAA CGTTAGACGG TCAACAAGTA
CCGGTAAAAA CGCTCAAGCC CGGCGACTGT GTACGAGTTT TGCCTGGTGA ACACATTCCA
GCAGATGGTG AAATCATTAA TAACCGAGTT CATATTGATG AATCTATGTT AACGGGTGAG
TCTTTACCCG TTGTCAAAGC GACAGGGGAT CACGTGTTTG CTGGAACACT GAATGGTGAT
GAATCGTTTG ATCTGCGTGT CACCGCTTCA AAAGCCGATT CAGTTATTTC CAATATTGTG
AGACTGCAAG ATGATGCTCA ATCCTCCAAG CCAAAAATTG CGGAAATTGC CGATATTGTG
GCGCGTTACT TTGTTGCCAT CATATTAGTT ATTGCTGCAG GCACATGGTT TTTCTGGCAT
CAGGTACGAC CTGAAGATGC GTTTTGGATT ATGCTTTCGG TATTAGTCGC CACCTGCCCT
TGCGCACTTT CTCTCGCAAC ACCGACCGCC TTGACCTGCG CGACCTCCAG TATGGGTAGC
GTTGGGGTTA TGTTACGCAA AAATCACGTG TTCGAAACGC TTTGCAAAGT GAATCATTTA
GTCATCGACA AAACGGGCAC CCTCACCCAT GGCAATATTG AAATTAGCAC TGTCGAAACA
CTGGATTCAT TAACGAAAGA ATCTTGTCTA GCGATAGCGG CTGAGCTTGA GAGCCATGCC
AACCACCCAA TAGCCAAAGC CTTTCGTCCT TATAAGGCAG AAAATGTCAC GGTGAGCGAA
GTAAGAAATA TCATCGGAAG CGGGATTGAA GGTGTCTTTG CAGGACAGAA AGTCAAAATT
GGCAGCGCAG AATTTGTGTT AGGCAATCCA CTAGATTCCG CACACAATTG TGTTTTCTTA
TCGCTGGATG GACGACATGT TGCCACCTTC CATTACCGAG ATCCAATTCG TAAAGAAGCT
AAAGCGTTTA TAGAGAAATT CCATGCTGCA GGCATCAAAA TCACTTTATT GACAGGAGAC
TCACAAACCA ATGCCCAAAG CGTTGCTAAT GAGATGCAAA TCGATAAGGT AGTCGCCCAG
GCGAAGCCCG AAGACAAGCT TACCTATCTA CGAGAATTGA ATAAAACCGA CGTGACTATG
ATGGTTGGTG ATGGTATTAA CGATGCTCCA ACACTAGCTG GTGCTCATAT TTCTGTTGCG
ATGGGCGGAG GTACAGATGT CGCTAAAGCC TCAGCAGATA TGGTACTCAT TGGTGATCGC
TTAGATAAAT TGCTTGAGGC AAGAGAGCTC GCGCTGAAAA CGCGTAAAAT CATTCGCGAA
AACCTCGCTT GGTCGTTGGG TTACAACTTA CTGATTTTAC CTCTTGCCGT TGCAGGATTA
GTCGCACCCT ATATTGCAGT GGTAGGGATG TCGGGAAGTT CGATTATTGT CGTGACCAAC
TCACTTCGTC TGCTGAAAAA GCAAGGGAGA TAA
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| Protein sequence | MDKTCYHCGE DVPAGTNFHV DILGEQRDMC CPGCQTVAQT IVDSGLVSYY QFRTAPAEKV
ELVPEQLKAL IHYDNSDVQA EFVRSKDDHS EVTLSLDGVS CAACAWLIEK QLHTEPGVVS
IRVNTTTNRA LLSWDRTKTQ LSHVLAQIHK LGYKAAPFEA DKHETQYHDA MKTYLYRLGI
AGLASMQVMM LAVALYLEAF GDLDAEFKNY FRWVSLIFAT PVLLYSALPF YLNAWRSIRG
RTLGMDVPVS LALIFAYIAS LVATITEQGE VFFESISMFT FFLLVGRFLE MRARRKAAAA
SGNLLKLIPA IATTLDGQQV PVKTLKPGDC VRVLPGEHIP ADGEIINNRV HIDESMLTGE
SLPVVKATGD HVFAGTLNGD ESFDLRVTAS KADSVISNIV RLQDDAQSSK PKIAEIADIV
ARYFVAIILV IAAGTWFFWH QVRPEDAFWI MLSVLVATCP CALSLATPTA LTCATSSMGS
VGVMLRKNHV FETLCKVNHL VIDKTGTLTH GNIEISTVET LDSLTKESCL AIAAELESHA
NHPIAKAFRP YKAENVTVSE VRNIIGSGIE GVFAGQKVKI GSAEFVLGNP LDSAHNCVFL
SLDGRHVATF HYRDPIRKEA KAFIEKFHAA GIKITLLTGD SQTNAQSVAN EMQIDKVVAQ
AKPEDKLTYL RELNKTDVTM MVGDGINDAP TLAGAHISVA MGGGTDVAKA SADMVLIGDR
LDKLLEAREL ALKTRKIIRE NLAWSLGYNL LILPLAVAGL VAPYIAVVGM SGSSIIVVTN
SLRLLKKQGR
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