| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1038 |
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| Symbol | potB |
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| ID | 5136085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1083361 |
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| End bp | 1084221 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532496 |
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| Product | spermidine/putrescine ABC transporter membrane protein |
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| Protein accession | YP_001216984 |
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| Protein GI | 147675686 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000702638 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGCA AAAAGCTTAA TCTACAAAAT GCGATTGTTA CCTTAATCGT AGGTTGGTTA
GTGCTGTTTG TACTGATCCC CAACCTGATG ATTATTGGTA CCAGTTTTCT GACTCGTGAT
GAAGCGAACC TGATTAAGTT TGCATTCACC TTTGAAAACT ACACGCGTCT GCTTGATCCA
CTATACGGAA AAGTGATGCT GCACTCGTTC TACATGGCGA TTGTTGCAAC ATTAATCTGT
CTAGTGATTG GCTATCCTTT TGCGTACATA GTGGCGAAAA TGCCTGAAAA ATGGCGTCCA
TTTATGCTGT TTTTGATTAT TGTTCCTTTC TGGACCAACT CACTCATCCG CACCTATGGT
TTAAAAATCG TACTCGGCAC GCAAGGTATT CTTAATCAAG CGCTAATGTC TCTGGGCCTT
ATTGATGCAC CACTGCGCAT TATGTTTACC GAAACAGCCG TCATGATCGG TCTGGTTTAC
ATTTTGTTGC CATTTATGAT CCTTCCGCTC TATTCAGCTA TCGAAAAATT GGATGGCACT
TATATTGAAG CGGCGCGCGA TCTCGGTGCC AACAAGTTTC AAACTTTAGT TCGCGTGATT
TTACCGCTGA CTATGCCTGG CATTATTGGT GGTTGTTTGC TGGTTCTGCT CCCTGCCCTC
GGTATGTTCT ACATCGCTGA CCTACTTGGC GGTGCGAAAA ACCTACTGAT CGGTAACGTG
ATTAAGAGCC AAGTACTCAA CGCCCGTGAC TGGCCATTTG GTGCCGCAAC CAGTATTGCA
CTGACTCTGG CCATGGCGAT CATGCTGTAC GCCTACTATC GTGCAGGTAA ACTTTTGAAT
AAGAAGGTGG AGCTAGACTA A
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| Protein sequence | MMSKKLNLQN AIVTLIVGWL VLFVLIPNLM IIGTSFLTRD EANLIKFAFT FENYTRLLDP
LYGKVMLHSF YMAIVATLIC LVIGYPFAYI VAKMPEKWRP FMLFLIIVPF WTNSLIRTYG
LKIVLGTQGI LNQALMSLGL IDAPLRIMFT ETAVMIGLVY ILLPFMILPL YSAIEKLDGT
YIEAARDLGA NKFQTLVRVI LPLTMPGIIG GCLLVLLPAL GMFYIADLLG GAKNLLIGNV
IKSQVLNARD WPFGAATSIA LTLAMAIMLY AYYRAGKLLN KKVELD
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