| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1037 |
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| Symbol | potC |
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| ID | 5137687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1082591 |
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| End bp | 1083361 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532495 |
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| Product | spermidine/putrescine ABC transporter membrane protein |
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| Protein accession | YP_001216983 |
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| Protein GI | 147673527 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000490693 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGACGTT CAATTAGATT TAGCTTTATG AGTTTGGTGT ACTTATTTTT GTACTTACCA
ATCATCGTTC TGATTGCAAA CTCATTTAAC GAAAACAAGT TTGGTATCAA ATGGGGCGGT
TTTACCACCA AGTGGTACCA CGCTTTGATG AATAACGACA GCTTAATGCA AGCCGCTTGG
CACTCCATCA ACGTAGCCGT GTTTTCTGCT ACTGCAGCAA CCTTGATCGG TAGTTTGACG
GCGGTTGCCC TCTTCCGCTA CCAATTTAAA GGTAAGAAAG TGGTGAGTGG CATGCTGTTT
GTCGTGATGA TGTCACCCGA TATCGTGATG GCTATTTCGC TACTTGCTCT ATTCTTAGTG
ATGGGGGCGA AACTGGGCTT CTTCACTCTG TTGATTGCGC ACATCACTTT CTGTCTGCCT
TTCGTTGTGG TGACGGTTTA CACTCGACTC AACGGCTTTG ACGTTAAGAT GCTTGAAGCA
GCAAAAGATC TCGGCGCTGG CGAATGGGTG ATTTTAAAGA AAATTATCCT GCCACTGGCG
AAACCTGCAG TTGCCGCAGG TTGGTTACTG AGCTTTACCC TATCTCTGGA TGATGTGATC
ATCAGTTCAT TTGTGACAGG GCCAACCTAC GAAATTCTGC CATTGAAGAT ATACTCAATG
GTGAAAGTGG GTATTTCACC TGAAGTAAAC GCACTGGCGA CCGTCATGCT TGTGGTTTCT
TTGGTACTTG TTGTCGCTTC ACAGTTGTTA GCAAGAGAAA AAGTGAAGTA A
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| Protein sequence | MGRSIRFSFM SLVYLFLYLP IIVLIANSFN ENKFGIKWGG FTTKWYHALM NNDSLMQAAW
HSINVAVFSA TAATLIGSLT AVALFRYQFK GKKVVSGMLF VVMMSPDIVM AISLLALFLV
MGAKLGFFTL LIAHITFCLP FVVVTVYTRL NGFDVKMLEA AKDLGAGEWV ILKKIILPLA
KPAVAAGWLL SFTLSLDDVI ISSFVTGPTY EILPLKIYSM VKVGISPEVN ALATVMLVVS
LVLVVASQLL AREKVK
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