| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1028 |
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| Symbol | |
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| ID | 5137214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1073032 |
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| End bp | 1074957 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640532486 |
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| Product | hypothetical protein |
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| Protein accession | YP_001216974 |
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| Protein GI | 147673623 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3675] Predicted lipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCAT TTAATTATTG CGTGCAGTGT AACCCTGAGG AAAACTGGTT AGAGCTAGAG
TTTCGGAGTG AAAATGATGA ACCGATAGAT GGTTTGCTAG TTACGATTAC GAACCAAAGT
GCCCCCTCTA ACACATACAC GCAAACCACA AGTTCGGGTA AGGTGTTGTT TGGCAAGATT
GCGGCTGGGG AATGGCGTGC TTCTGTAAGC CAAGCTTCTC TGTTAACTGA AGTCGAAAAA
TATGCCAGCC GTAAAGAGGG ACAAGAGTCG CCAGTGAAAA AACGAGCTGC GGCAGAACTT
GACGCCGCAG ATAAAGATAC GAAGCAGTAC CGCTTTACCA CTATTGGTGA TTTCTGGGAT
GAAGCACCAA AAGATGAGTT TTTACAAAAG CAGCATAAAG GGATAGATGT CAATGCTTCT
GCTGAGAAAG CAGGGTTTAG ACTCAGTCAT AACCAGACCT ATGTTTTTGA AATCAAAGCA
CTACGTAGCT ATATGCCAGT GATTATTGAT ACCGATGAAT TTAACTTGGT GAATAGTTAT
ACCTTTGCGT TGTTGTCGAA ATTAGCTTAT GCGACTAACG ATTTTAATAG GGATGATGGT
AAGACAATAG ATAATCAGGG AGCAATTAGC ACGGTTATTT CTCAATTGAA GCGTAAAGAA
AGACCGACTT ATTCTGGAGA TTTACAAGCA AAGTGGTTAT TAGAGGAAAT TCCATATAGC
AAAGCGTTAA GTGCCCAATA TTATGCTGAG GATGATGTCG GTAGTGAAGG TTACATCATC
TTTAACGATG AATTGGCGAT TATAGGTGTG AGAGGTACAG AGCCTTATTT TCAGAGTAAG
AAACCACCTG TTGATAACAC TAAATTTAAA ATTATAAAAG CGGCTTCAGG TATGGCGGCT
GTGATTGCGG ATAAGATAGA AAGTGCTACC GATTCACCAG GAATGAAAGA CCTTATTATA
ACAGACCTTG ATGCTGCGCA AATCGCCCCC GAAGAGTTTG GTGGAACATA TGTTCATCGG
GGGTTTTACC AATATACGAT GGCTTTGTTA TCTTTGATGG AGAAAGATCT AGGGCTACAT
AAAATAAAAA AATTCTATTG TTGTGGCCAT AGCTTAGGGG GCGCTGGTGC ATTACTTATA
AGTGCATTGA TTAAAGATAG CTATCATCCT CCAGTATTGC GTTTATATAC ATATGGAATG
CCACGAGTGG GAACTCGCAG TTTTGTAGAG CGCTATCAAA ATATTTTGCA TTACCGTCAT
GTTAATAATC ACGATTTGGT GCCACAGATA CCAACAGTAT GGATGAACAC AGATGTATCT
GAAGGATTCC ATGTACTTGA TGTATTTAAA AGCCGTGTTG ATCTGATGAG AAAAATGCTC
ACTGATGATG ATGATGACAA TTATCAACAC CATGGTCATT TGTCTCAGTT ACTAACTTAT
AATTCAAATA ACCAAGTCTT ACTGACACCC AAACAAACTC AAGTCACTAT GCTAGACCTA
GCAAATTTAG CCACTAATGA TTCTGTTGCT ATGGTAGATG GTTTATCAGA TGCCTCAATA
GTAGAGCATG GAATGGAGCA GCATATACCC AATTTATTTG AGCAGTTAAC AGCACTAAGT
GATGAAAGTT TAATGGTGCA TTATCAACGA GCGATTTCAG CCTTAGAGCA GGAAATTGCT
ACGTTGCAAC AAAGTTATCT TACAGTTAAA CAAGCTTGGA TTGAATCTAT AGGAAATGGC
ACGCCGACTA TGAATATCGG ACGTTTGATG AGTGAAATGC ATTCTATAAA TAAATTAATA
GAGAACCGTA ATAAAATTAG AGGTGAGCTA AGGCAGATAG TCTCTGATCC TCAGCGTATG
CCTGCAACTA AATTTTTAAT TTCACAGCAA ACCTTACCAG ATGAAATCAA GGTGCAAATA
AGATGA
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| Protein sequence | MDSFNYCVQC NPEENWLELE FRSENDEPID GLLVTITNQS APSNTYTQTT SSGKVLFGKI
AAGEWRASVS QASLLTEVEK YASRKEGQES PVKKRAAAEL DAADKDTKQY RFTTIGDFWD
EAPKDEFLQK QHKGIDVNAS AEKAGFRLSH NQTYVFEIKA LRSYMPVIID TDEFNLVNSY
TFALLSKLAY ATNDFNRDDG KTIDNQGAIS TVISQLKRKE RPTYSGDLQA KWLLEEIPYS
KALSAQYYAE DDVGSEGYII FNDELAIIGV RGTEPYFQSK KPPVDNTKFK IIKAASGMAA
VIADKIESAT DSPGMKDLII TDLDAAQIAP EEFGGTYVHR GFYQYTMALL SLMEKDLGLH
KIKKFYCCGH SLGGAGALLI SALIKDSYHP PVLRLYTYGM PRVGTRSFVE RYQNILHYRH
VNNHDLVPQI PTVWMNTDVS EGFHVLDVFK SRVDLMRKML TDDDDDNYQH HGHLSQLLTY
NSNNQVLLTP KQTQVTMLDL ANLATNDSVA MVDGLSDASI VEHGMEQHIP NLFEQLTALS
DESLMVHYQR AISALEQEIA TLQQSYLTVK QAWIESIGNG TPTMNIGRLM SEMHSINKLI
ENRNKIRGEL RQIVSDPQRM PATKFLISQQ TLPDEIKVQI R
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