| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1022 |
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| Symbol | vceB |
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| ID | 5135707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1062761 |
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| End bp | 1064296 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532480 |
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| Product | multidrug resistance protein VceB |
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| Protein accession | YP_001216968 |
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| Protein GI | 147673125 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATA ACGCTGACAA TGAGATGCAA CCTCTGTCAG GATGGGCACT GTTTTTCGGT
GCCCTGTGTC TGGCAATGGC CAACTTTCTC GCTATTTTGG ATACCACTAT TGCTAACGTC
TCTGTCTCCA ATATCGCTGG TAGCCTAGGA ACTTCAACTA GCCAAGGGAC TTATGTGATT
ACCTCTTATG CGGTCGCAGA GGCGATCTCG GTACCTCTTA CGGGTTGGTT GGCTTCGCGA
TTTGGCTCTA TTCGAGTCTT TGTCACCTGT TTTCTGTTAT TCGGTGTTTT TTCATTACTC
TGTGGTTTAG CCAATAGCAT GAGCACGCTG GTGATGTTTC GAGTGTTGCT TGGTTTCGTG
GGAGGGCCTT TAATGCCACT TTCACAAACC TTGATGATGC GAATATTCCC CAAAAACAAA
AGCCATGCTG CGATTGGTAT CTGGTCGATG ACCACGCTCG TGGCACCTAT CATGGGACCT
ATTCTTGGCG GCGTGTTGTG TGACCAACTC AGTTGGCCAT ACATCTTTTT CATCAAAATG
CCTTTCGCTA TTGCCGCGGC GTTACTGTGT TGGAAATTGC TGAAAAAATT TGAAACCAAA
ACGACGCATT CAAAAATTGA TAAAGTGGGG CTGGCGTTAT TGGTCGTGTG GGTCGCCGCA
TTGCAATTAA TGTTGGATGA AGGTAAGGAT CATGACTGGT TTGAGTCATC GCGCATTGTG
TTTTTGGCGG TGATTGCTGT GATTGGTTTC ATTGCATTCT TGATTTGGGA GCTAACGGAG
CGAAACCCTG TCGTGGATTT AAAGGTGTTC CGACATCGAG GTTACAGCAT CAGTTTGGTG
ACGTTGTCAC TCGCGTTCGG CGCTTTTTTT AGTATTTCTG TAGTAACACC TTTATGGTTG
CAAATTTACA TGGGTTATAC CGCCACCATT TCAGGCCACG CTACTGCCAG TATGGGGATT
CTAGCGGTTT TTTTGGCACC GATAGTGGCC AATCTGTCCT CGAAATTTGA TCCTCGGCCC
TTTGTTTTTG CTGGCGTGAT GTGGCTTGGG CTGTGGACTT TCATGCGTGG CTTTAACACA
GTAGATATGA CGTTTTCGCA AATCAGTTGG CCTTTATTTT TCCAAGGTAT CGGCATGCCG
TTGTTCTTTG TGCCATTGAC TGCGATAGCC CTTGGTAGTG TCAAACCGCA CGAAATGGAA
TCAGCAGCAG GATTGATGAA CTTTATCCGA ACCTTGTCCG GTGCGTTTGC GACCTCAATG
ATCAACACTT CATGGGAGCA TGAAACACGT TATGTGCATG CTGAGTTGGC AGGCTTAACT
GATAAAGCGG GTGTCGCGGC ACAAGCGATG CAAAGTTCAG GAATGAGTGC CGAGCAGACG
CGCTCTGCGA TGGACTGGAT ATTGCAAAAT CAGAGTGTGA TGGTGGCAAC CAACCAGTTG
TTTATCGTGA TTGCACTGAT CTTTGTATTT GCAGCCTGCA TGATTTGGTT TGCGCCAAAA
CCCAAGCAAG CGGTGGATAC CTCTGCTGTT CATTAA
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| Protein sequence | MSHNADNEMQ PLSGWALFFG ALCLAMANFL AILDTTIANV SVSNIAGSLG TSTSQGTYVI
TSYAVAEAIS VPLTGWLASR FGSIRVFVTC FLLFGVFSLL CGLANSMSTL VMFRVLLGFV
GGPLMPLSQT LMMRIFPKNK SHAAIGIWSM TTLVAPIMGP ILGGVLCDQL SWPYIFFIKM
PFAIAAALLC WKLLKKFETK TTHSKIDKVG LALLVVWVAA LQLMLDEGKD HDWFESSRIV
FLAVIAVIGF IAFLIWELTE RNPVVDLKVF RHRGYSISLV TLSLAFGAFF SISVVTPLWL
QIYMGYTATI SGHATASMGI LAVFLAPIVA NLSSKFDPRP FVFAGVMWLG LWTFMRGFNT
VDMTFSQISW PLFFQGIGMP LFFVPLTAIA LGSVKPHEME SAAGLMNFIR TLSGAFATSM
INTSWEHETR YVHAELAGLT DKAGVAAQAM QSSGMSAEQT RSAMDWILQN QSVMVATNQL
FIVIALIFVF AACMIWFAPK PKQAVDTSAV H
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