| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1018 |
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| Symbol | rhlE-1 |
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| ID | 5136730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1058135 |
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| End bp | 1059328 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532476 |
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| Product | ATP-dependent RNA helicase RhlE |
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| Protein accession | YP_001216964 |
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| Protein GI | 147674915 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTT CTCAACTTGG ATTAAGTGAC GTTCTGGTAC AAACCGTAGC GCAACTTGGT
TACCAAAAAC CGACCCATAT TCAAACCCAA GCGATTCCAG TGATTTTGCA GGGACGTGAT
CTGATTGCCG CTGCGCAAAC AGGCACGGGT AAAACCGCCA GTTTCGTCCT GCCTATTTTG
GAAAAACTGC GCCAAGGGCA AACGCAACGT AAAAAACGTG TCCGCGCCTT GATTTTAGTG
CCAACCCGCG AGCTTGCGAT GCAAGTGGCG GAAAAAGTAG AGCAATACGG TAAAGACACG
GGCTTAAAGA GCCTTGCTGT GTTTGGTGGC GTCGATGAAC AAGCACAGAA GCAGCGCTTG
ATTGATGGCG TGGATGTGCT GGTGGCCACA CCGGGGCGTT TGATGGATCT CTATGGGCAA
CGCGCCGTCT ATTTCGAAGA GATAGAAATG GTGGTACTCG ACGAAGCCGA CCGCATGCTG
GATATGGGTT TTATTGAGTC GATCAACAAA ATCATTGACT GCCTGCCGAG TGAAGTACAG
TTTCTGCTTT TTTCCGCGAC ACTGTCACGT AAAGTGCGTG AGTTAGCGAA AACCGCAGTA
CGCGATCCGC ATGAAATCAG TATTGCCGCC AACCAAGCCT CAAAAAGCAA TATCAGCCAA
TGGCTGATCA CCGTCGATAA AGACACCAAA TCCGCATTGT TGAGCCATTT AATCAATGAG
CAGCAGTGGG ATCAGGCATT GATTTTTATT GAAACCAAAC ATGGTGCAGC CAAGCTCGTT
TCTCAACTTG AAAAGCGGGG CATCCATGCG GAAGCGTTTC ATAGTGGCCG TAGCCAAGCC
ATTCGCGCCC AACTGCTTGA AGATTTTAAG TCAGGAAAAA TCAAATACTT GGTCGCAACA
GGTGTCGCAG CACGCGGCAT TGATATTGAC CAGCTATCGC GTGTAGTGAA CTACGATTTG
CCCTTCCCAG CCGATGAATA TGTCCACCGA ATCGGTCGAA CAGGGCGCGC AGAGGCTGTC
GGCGAAGCCA TTTCGTTTGT CTCAAAAGAC AACTTCAAAA ATCTGTGCAT GATTGAAAGC
CGCTTAGGCC ATTTGATTGA GCGTCGCGTG GTAGAAGGCT TTGAGCCGAA AAAGCCCGTG
CCGATTTCGA TTTTGAACTA TGTGCCCAAA CATAAGCGTG CGGTGCAAGA TTAA
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| Protein sequence | MSFSQLGLSD VLVQTVAQLG YQKPTHIQTQ AIPVILQGRD LIAAAQTGTG KTASFVLPIL
EKLRQGQTQR KKRVRALILV PTRELAMQVA EKVEQYGKDT GLKSLAVFGG VDEQAQKQRL
IDGVDVLVAT PGRLMDLYGQ RAVYFEEIEM VVLDEADRML DMGFIESINK IIDCLPSEVQ
FLLFSATLSR KVRELAKTAV RDPHEISIAA NQASKSNISQ WLITVDKDTK SALLSHLINE
QQWDQALIFI ETKHGAAKLV SQLEKRGIHA EAFHSGRSQA IRAQLLEDFK SGKIKYLVAT
GVAARGIDID QLSRVVNYDL PFPADEYVHR IGRTGRAEAV GEAISFVSKD NFKNLCMIES
RLGHLIERRV VEGFEPKKPV PISILNYVPK HKRAVQD
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