| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1001 |
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| Symbol | |
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| ID | 5135233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1039032 |
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| End bp | 1039982 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640532460 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001216948 |
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| Protein GI | 147673870 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACGCG AAATTGCAAA AATGGGATTA CCGATGAAAC TTGATGATTT GGCGCTGTTT
TTAACCGTGG TGCGTTGTGG CAGTTTTGCC TTAGCAGCGA AACAGAAATC GATGTCTACC
AGCACGCTGA GCCGCCGTAT TCAGCAACTT GAACAAGATA CGGGCAGCAT TTTGCTGATC
CGCAACAGTA AAGAGTTGGT ACTGACCAAA GAAGGTGAAC AGCTATTTCA CAGCTACGCC
GAGCTGTTTG CCCAAATTGA GCGCAAACAA GAAGAGGTCG AGCAAGCGAA ACGAGATTAC
CGCGGCGAAA TCGCGATAAG TGCACCCGTG TTACCTCTGC GCCACCAATT AACCCCTTTG
GCGCTGGAGT TTGCCGAGCT GCATCCGAAT GTCACACTGC GCATGCAAGT TGGCTCAGGG
CTCGACTATT TCAGCCAGCG GGATCTGGAT ATCGCGCTGC GTTTTGGCCC ACAGCCGGAG
TCCGACTGGG TAGCGCGTAA ACTGGCGCGT AACCCTTCCG TACTCTGTGC CAGTGCTGAG
CTTGCTGCCA AACTCAGCAC AGTAACGCTT ACCTTAGCGC ATCCCGAGCA GTTAAAAGAG
CATCCCCTAC TCAGTCTCAA CCACAAGCTG CCGTGGATTT TTCATCACCA CAGCGTCGCG
CAAAAAGTGC AATTTATTCC GACGGCGCGT TTGTGCTCCG ACGAGCTGGA CACGATAGTG
CAAGCCACCT TACAAGGCAT GGGCATCGCC CGCTTACCAA GAGGATTAAT GGAGCCACTC
CTGCGTAGCG GTCAGCTCAT CGAGCTGCTC CCCGAGTGGG AAATTGAAGG CGCAGATGTG
TATCTGCTCC ATCCGCAGCG CCGTTTTTTA CCTGAGCGCA CTCAAGCCCT GATTGATTAC
ATCATGACGC ACTGGTCACG TGTCGCATTC AGTTATTGGC ATCAGCCTTA A
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| Protein sequence | MGREIAKMGL PMKLDDLALF LTVVRCGSFA LAAKQKSMST STLSRRIQQL EQDTGSILLI
RNSKELVLTK EGEQLFHSYA ELFAQIERKQ EEVEQAKRDY RGEIAISAPV LPLRHQLTPL
ALEFAELHPN VTLRMQVGSG LDYFSQRDLD IALRFGPQPE SDWVARKLAR NPSVLCASAE
LAAKLSTVTL TLAHPEQLKE HPLLSLNHKL PWIFHHHSVA QKVQFIPTAR LCSDELDTIV
QATLQGMGIA RLPRGLMEPL LRSGQLIELL PEWEIEGADV YLLHPQRRFL PERTQALIDY
IMTHWSRVAF SYWHQP
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