Gene VC0395_A0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0987 
Symbol 
ID5137255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1024835 
End bp1026376 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content53% 
IMG OID640532445 
Producthypothetical protein 
Protein accessionYP_001216933 
Protein GI147674259 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCATCGG GCAGCCCTGA AGATGTCAGC AAAATTTCCC CTCTGCGTGC CACTGAACTT 
TATTTAGAGC ACTTACAAGC CGCGTGGGAT CATGCGCATC CTGATGCCCC ATTAGCTGAA
CAAGATGTCA CCATTACCGT TCCTGCTTCG TTTGATCCTG CCGCCCGTGA TTTAACCGCG
GAAGCGGCAC GTAATATTGG CCTGCAGCAC TTTACTCTGC TCGAAGAACC ACAAGCGGCG
CTGTACAGCT GGATTGATAA CCGCCATGAG CAATGGCGCA GTGAAGTGAG CGTTGGCGAT
GTGGTGTTAG TGATCGATAT CGGCGGCGGT ACCACTGACC TCTCACTGGT CGAAGTGACC
GAAGAAGAAG GCAACCTTGC CCTCAAGCGT ATTGCCGTTG GCGAACATAT TCTGCTCGGT
GGCGATAACA TGGATCTCGC CCTCGCCTAT CGTCTGAAAA TGAAGTTGGC GCAGGAAGGC
AAAGAGCTGC AAATGTGGCA AGTACAAGCC ATGACACACG CATGCCGTGA TGCAAAAGAA
GTACTCCTCA GCCAACCGGA TTTGGCCGCA GTGCCGATCG TGGTACCAAG CCGCGGTTCT
AAACTGCTCG GCGCAACACT GAAAACCGAA CTGACTCGTG AAGAAGTTCA GCAAACGCTA
GTCGATGGTT TCTTCCCAGC AGTTTCTATC AACGAACATC CACAACACAA AATGCGCGGC
GCACTGACTC AGATGAGTTT GCCTTACGCG CAAGATGCCG GCATCACTCG CCACATCGCC
GCATTTTTAA GTAAACAAGC CAACGCGCAA GGTCAAACCG AAAGCCTGCC TTTCGCGATG
GCCGGCATTC CGGGCATGGC CGCTCCACAA GCCGATTTCA TTAAGCCAAG TGCCATTTTA
CTTAACGGCG GTGTGCTTAA ATCGACTCTG CTTGCCGATC GTTTGCTAGA AACCATCAAT
GCTTGGTTAA CTCAGGCCAA TGCGGCTCCT GCCAAACTCC TTGCCGGAGT GGATTTGGAT
CTGGCAGTGG CACGTGGCGC GGCTTACTAC GGCGTTGTGC GTCAAGGTCA AGGGATACGC
ATCCGTGGTG GTATTGCTTC GGCTTACTAT GTCGGGATTG AAAGTGCGAT GCCAGCCATT
CCGGGCATGT TACCGCCGAT GGAAGCACTC TGCGTTGCTC CATTTGGTAT GGAAGAAGGC
TCGAGCGCGC AAGTCGCGGA TCGCCAGTTT GGCCTAGTGA TTGGTGAGCC AGTGCACTTC
CAATTCTATG GCTCCACCGT TCGCCGTGAT GATGTTGCGG GGACTCACCT TGTCGATTGG
GCCAATGATG AACTAGACGA TCTGCCAACC ATTCAGATCA CCTTACCTGT TTCTGAAGGT
CGCCGAGCAG GAGAAGTGGT TCCGGTTACG CTGGCATCAC GAGTGACTGA GCTCGGTACG
CTCTATCTTG AAGCGATTGC GGCTGATAAT GGCCAAAAAT GGCATGTGGA ATTTGATGTT
CGGGATAACC CACAGAACGA ACCTACACCA CAGCAACATT AA
 
Protein sequence
MPSGSPEDVS KISPLRATEL YLEHLQAAWD HAHPDAPLAE QDVTITVPAS FDPAARDLTA 
EAARNIGLQH FTLLEEPQAA LYSWIDNRHE QWRSEVSVGD VVLVIDIGGG TTDLSLVEVT
EEEGNLALKR IAVGEHILLG GDNMDLALAY RLKMKLAQEG KELQMWQVQA MTHACRDAKE
VLLSQPDLAA VPIVVPSRGS KLLGATLKTE LTREEVQQTL VDGFFPAVSI NEHPQHKMRG
ALTQMSLPYA QDAGITRHIA AFLSKQANAQ GQTESLPFAM AGIPGMAAPQ ADFIKPSAIL
LNGGVLKSTL LADRLLETIN AWLTQANAAP AKLLAGVDLD LAVARGAAYY GVVRQGQGIR
IRGGIASAYY VGIESAMPAI PGMLPPMEAL CVAPFGMEEG SSAQVADRQF GLVIGEPVHF
QFYGSTVRRD DVAGTHLVDW ANDELDDLPT IQITLPVSEG RRAGEVVPVT LASRVTELGT
LYLEAIAADN GQKWHVEFDV RDNPQNEPTP QQH