| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0974 |
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| Symbol | |
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| ID | 5136330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1008297 |
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| End bp | 1009502 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532432 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | YP_001216920 |
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| Protein GI | 147675096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00117291 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCCA CAAATAAAGC GACGCCAGAG ACTTCTGACG CGCATTCCAA GCATACCAAT
TTGCTTTATA ACCCAACCTT CCGTTCGGTT GTGTTCCAAC TTCTCGCCGT TTGTGTACTC
GCATTTTTTC TCTACACCAT AGTGAACAAT GCGTTAACTA ACCTTGAATC TCGAGGGATC
GCAACGGGGT TCGCCTTTCT AGAGCAAACC GCTGGTTTTG GTATCAGCCA AAGCTTAATT
CCCTACGATG AAACTTACAG CTATGGCCGA ACGTTTCTGG TGGGCTTGCT CAATACCGCT
CTGGTTTCAG TACTCGGCAT CTTATTAGCG ACCATACTGG GATTTTTGAT TGGCATTGCT
CGCCTCTCCA GTAACTGGCT AATCAGCCGC TTAGCAGCGG TCTACATCGA AACATTTCGT
AATTTGCCAC TGCTACTGCA AATATTCTTT TGGTATTTCG TTGTGCTTCA AGCCTTGCCA
TCGGCAAGGG AAAGCATGCA TCTTGGCGAG TGGTTTTACC TCAACATAAA AGGTCTGTAT
CTCGCGAAGC CAATCTTTGA ATCCGGTAGC ATCTGGGTTC TGGTTGCCTT AATCGCTGGT
ATCATTGCCT GTTGGGTATT GAGTATCTGG GCAACAAATC GCCAACGTTT AACGGGACAA
CAAACCCCGA TGGGACGATA CATACTCTTA CTGTGTGTCA CTTTTCCAGT GTTGGTTTAT
TTTCTACTTG GCCAACCTAT CACAGCAGAA TATCCCGTAC TACGCGGATT CAACTTCCAA
GGCGGGATCT CGGTACTGCC TGAACTGGCG GCATTACTGG TCGCCTTGAC CATCTATACC
GCATCCTTCA TCGCAGAGAT TGTGCGTTCT GGGATCAATG CGGTCAGCCA CGGGCAAACG
GAAGCAGCAA TGTCTCTCGG TTTAACTCGT ACGAAAACCT TAAAACTGGT CATTATTCCT
CAAGCACTCA GGATCATCAT TCCACCGCTG ACTAGCCAAT ATCTGAATCT AACCAAAAAC
TCCTCACTGG CCATGGCTAT TGGCTACCCA GACTTGGTTT CTGTATTTGC GGGCACCACC
CTCAACCAAA CAGGACAAGC GATTGAGATC ATTTCGATGA CCATGTTGGT CTATCTCACG
CTGAGTTTAT TAACTTCAGC CTTAATGAAC CTGTATAACC GTAAAGTGGC ACTGGTGGAG
AGATAA
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| Protein sequence | MKPTNKATPE TSDAHSKHTN LLYNPTFRSV VFQLLAVCVL AFFLYTIVNN ALTNLESRGI
ATGFAFLEQT AGFGISQSLI PYDETYSYGR TFLVGLLNTA LVSVLGILLA TILGFLIGIA
RLSSNWLISR LAAVYIETFR NLPLLLQIFF WYFVVLQALP SARESMHLGE WFYLNIKGLY
LAKPIFESGS IWVLVALIAG IIACWVLSIW ATNRQRLTGQ QTPMGRYILL LCVTFPVLVY
FLLGQPITAE YPVLRGFNFQ GGISVLPELA ALLVALTIYT ASFIAEIVRS GINAVSHGQT
EAAMSLGLTR TKTLKLVIIP QALRIIIPPL TSQYLNLTKN SSLAMAIGYP DLVSVFAGTT
LNQTGQAIEI ISMTMLVYLT LSLLTSALMN LYNRKVALVE R
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