| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0973 |
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| Symbol | |
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| ID | 5136651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1007197 |
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| End bp | 1008294 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532431 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | YP_001216919 |
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| Protein GI | 147674160 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00000454558 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACAC ATCAATTTCA ACCTAGCCTA CCGCCGCCAT CCAACACAAC AGGGGTCGTC
GGTTGGTTAC GGAAAAATTT ATTTAATGGC GTGTTTAACT CAATCGCAAC CTTGGTGTTA
GGCTACTTAG CTATTCAAGG TCTCCTAAAT ATCCTCGATT GGGCAATTTT TAACGCCAAC
TGGAGCGGAA CCACGCGTAA CGACTGCACC CTTGAGGGCG CTTGCTGGGT ATTCATCAGT
GTTCGCTGGG AGCAGTTCAT GTACGGCTTC TACCCCGCGG CAGAACTGTG GAGACCAAGG
CTATTCTTCT TCACTCTGGC TCTTTTTGTC GCACTGCTGG CTTATGAAAA AACACCAAAG
CGAGGTTGGA TTTGGCTGGT TTTCGTTAAC ATCTATCCCT TCTTCGCTGC CCTACTTCTT
TATGGTGGTG TCTTCGGGCT GGAAGTGGTC GAAACCCATA AATGGGGTGG ATTGTTAGTC
ACTTTGATCA TCGCTTTAGT CGGCATCATC GCTTCACTAC CAATTGGCGT TGCACTGGCT
TTAGGACGTC GCTCCGACAT GCCCATTATT CGCAGCTTAT GTACCGTCTA CATTGAGGTA
TGGCGTGGGG TGCCTTTAAT TACCGTACTT TTCATGGCTT CGGTAATGCT GCCACTCTTT
TTATCTCAAG GCAGTGAGAT AGATAAGCTA CTGCGTGCCT TGATTGGCGT GGTGATGTTC
AGTGCCGCGT ACATGGCGGA AGTAATCCGT GGTGGTTTGC AAGCGATTCC CAAAGGCCAG
TATGAGGCAG CCGATGCGCT CGGTTTAAGT TACTGGAAAA AAATGGGGCT GATTATTCTG
CCGCAAGCGC TGAAAATCAC CATTCCATCG ATTGTAAATA CCTTTATTGG TCTGTTTAAA
GACACCAGTC TGGTGTTGAT TATCGGCATG TTTGATGTGC TCGGCATCGG ACAATCCGCC
AATACCGACC CGAATTGGCT CGGTTTTGCT ACAGAAAGTT ATGTTTTTGT CGCGTTAGTG
TTCTGGATCT TCTGCTTTGG CATGTCGAGA TACTCGATTT GGCTCGAAGG CAAACTCCAT
ACCGGTCACA AACGATAA
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| Protein sequence | MATHQFQPSL PPPSNTTGVV GWLRKNLFNG VFNSIATLVL GYLAIQGLLN ILDWAIFNAN
WSGTTRNDCT LEGACWVFIS VRWEQFMYGF YPAAELWRPR LFFFTLALFV ALLAYEKTPK
RGWIWLVFVN IYPFFAALLL YGGVFGLEVV ETHKWGGLLV TLIIALVGII ASLPIGVALA
LGRRSDMPII RSLCTVYIEV WRGVPLITVL FMASVMLPLF LSQGSEIDKL LRALIGVVMF
SAAYMAEVIR GGLQAIPKGQ YEAADALGLS YWKKMGLIIL PQALKITIPS IVNTFIGLFK
DTSLVLIIGM FDVLGIGQSA NTDPNWLGFA TESYVFVALV FWIFCFGMSR YSIWLEGKLH
TGHKR
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