Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0968 |
Symbol | |
ID | 5135424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1003280 |
End bp | 1004536 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640532426 |
Product | hypothetical protein |
Protein accession | YP_001216914 |
Protein GI | 147673309 |
COG category | [R] General function prediction only |
COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000850762 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTTTTCT TCATCAGTTC CACGACAATA GCCGCCCATT TCTATTTCCA TCTGAGTAGC GTAATGACTC CTGCAATTTA TTTGGTCAAA GGTCGAGACA AATCTTTGCG TCGTAAACAT CCGTGGGTTT TTTCTCGTGG GATCAGCAAA GTCGAAGGGA CTCCTAAACT GGGAGAAACT GTCGATGTTT ACTCCTTTGA AGGCAAATGG TTAGCCAAAG CGGCCTACTC ACCGCATTCA CAAATTACTG CGCGTGTCTG GAGCTTTGAA CAAGAGCCGA TTGATCGCGA TTTCTTCATT AAACGCATCG AACAAGCACA ATTATTGCGC AACGATATTA TCGAACGTGA TGGCTTAACC GGTTACCGTT TAATTGCCGC AGAATCAGAC GGCTTACCTG GCATTACTAT CGACAAATAT CAAGATTATT TGGTCTGCCA ACTACTGAGT GCCGGTGCCG AGTATCAAAA ACAGACTCTG GTCGAGGCAT TATTACATTG CTTCCCTGAG TGCCATATTT ATGAGCGTTC CGATGTTGCG GTGCGTAAAA AAGAAGGGCT GGACGAGCGC GTTGGGGTAC TGCACGGTGA ATTACCACCT AAATCGGTCG TGATTGAAGA AAATGGCGTT AAGATCAGCG TCGATATTGT GGGTGGACAC AAAACGGGTT TCTATCTAGA TCAACGCGAC AGCCGCTTCC AATCCATGAA ATACGTTAAA GAGAAAGAAG TGCTGAACTG CTTCTCTTAC ACGGGTGGTT TTGGTTTATA CGCACTCAAA GGCGGAGCTA AGCGTGTGAT CAACGCAGAT GTCTCTCAAC CAGCCTTGGA TACGGCTAAG TTCAATGCTG AATTGAACGG TTTCGATATC AGTAAAAAGC GTGCGGTGTT CTTGAATGCC GATGTATTTA AACTGCTGCG CGAATACCGC GACCAAGGCA CACGTTTTGA TGTGGTGGTG ATGGATCCCC CCAAGTTTGC CGAATCTAAA GCCCAGCTGG ATGGTGCATG CCGCGGCTAT AAAGACATCA ACATGCTGGC CATGCAGATC TTAAACCCAG GTGGCACCCT GCTCACCTAC TCGTGTTCAG GGTTAATGGA TCAAGTGCTA TTTCAGAAAA TTATTGCCGA TGCGGCTCTC GATGCTGGAC GTGATGTAAA GTTTGTTGAG CGTTTTGAAC AAGCGGCCGA TCACCCAACC GATACCGCTT ATCCTGAAGG TTTTTATCTC AAAGGCTTTG CTTGTAAGGT TTTATAA
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Protein sequence | MLFFISSTTI AAHFYFHLSS VMTPAIYLVK GRDKSLRRKH PWVFSRGISK VEGTPKLGET VDVYSFEGKW LAKAAYSPHS QITARVWSFE QEPIDRDFFI KRIEQAQLLR NDIIERDGLT GYRLIAAESD GLPGITIDKY QDYLVCQLLS AGAEYQKQTL VEALLHCFPE CHIYERSDVA VRKKEGLDER VGVLHGELPP KSVVIEENGV KISVDIVGGH KTGFYLDQRD SRFQSMKYVK EKEVLNCFSY TGGFGLYALK GGAKRVINAD VSQPALDTAK FNAELNGFDI SKKRAVFLNA DVFKLLREYR DQGTRFDVVV MDPPKFAESK AQLDGACRGY KDINMLAMQI LNPGGTLLTY SCSGLMDQVL FQKIIADAAL DAGRDVKFVE RFEQAADHPT DTAYPEGFYL KGFACKVL
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