Gene VC0395_A0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0966 
Symbol 
ID5136205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp999184 
End bp999657 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content47% 
IMG OID640532424 
Productputative antioxidant 
Protein accessionYP_001216912 
Protein GI147674520 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.272131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAAA TCGGACAAAC CTTACCAGAT GTTCAACTGA GCCAAAGAAC CAGTGAGGGT 
ACACTGACTC ACTCTGTAAC CACTTTGTTT GCTAACAAAA AAGTCGTACT GTTTGCCGTT
CCGGGTGCCT TCACCCCGAC TTGCTCAGAA GCACATCTAC CTGGCTATGT CGTCTTGGCA
GACAAATATA AAGAGAAAGG CGTCGATATG ATCGCTTGCG TTTCAGTTAA CGATGCTTTT
GTGATGAAAG CATGGGGCGA AGCGCAAAAT GCGAGCGAAA TTACCATGCT GGCTGATGGC
GACGCGAGCT TTACTAAAGC CTTAGGTCTC GAAATGGACA CAGGTAACTT TGGTGGCGTG
CGCTCGCAAC GCTACGCCAT GGTGATTGAA AATAACGTAG TCACTCTGCT CAATGTTGAG
CCACCAAAAA CCTTTGAACT GAGCAAAGCA GAAACTGTAC TAGCCAGTTT GTAA
 
Protein sequence
MIQIGQTLPD VQLSQRTSEG TLTHSVTTLF ANKKVVLFAV PGAFTPTCSE AHLPGYVVLA 
DKYKEKGVDM IACVSVNDAF VMKAWGEAQN ASEITMLADG DASFTKALGL EMDTGNFGGV
RSQRYAMVIE NNVVTLLNVE PPKTFELSKA ETVLASL