| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0955 |
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| Symbol | |
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| ID | 5136855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 983123 |
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| End bp | 984325 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640532413 |
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| Product | putative AcnD-accessory protein PrpF |
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| Protein accession | YP_001216901 |
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| Protein GI | 147674246 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAGA CAGTGTCACA AATTCGTATT CCTGCCACCT ACATGCGCGG CGGAACCAGC
AAAGGGGTGT TTTTCCGTCT GAACGATTTG CCGCTTGAAG CGCAGCTTCC CGGTGCTGCC
CGTGATGCTC TGTTGTTACG AGTGATTGGT AGCCCAGATC CTTACGGTAA ACAGATTGAT
GGCATGGGCG GTGCGACATC GAGCACCAGC AAAACGGTGA TTGTGAGTGC CAGTTCGCGC
GAAGATCACG ATGTGGATTA TCTGTTCGGG CAAGTGGCGA TAGATAAACC GTTTGTCGAT
TGGAGCGGAA ACTGCGGCAA CCTTTCCGCT GCGGTGGGGC CGTTTGCGAT CCATGCTGGG
CTGATTCCTG CTGAGCGTAT TCCGCACAAT GGTGTGGTGG CGGTGAAAGT GTGGCAAGTC
AACATCAGCA AAACCATTGT AGTGCATGTG CCGATAGTCA ATGGCGCAGT GCAGGAGTGC
GGTGAATTTG AACTCGATGG CGTGACTTTT CCGGCGGCCG AAGTGCAGGT GGATTTTGTG
GATCCTGCGG ATGACAGCGG TGCTATGTTC CCAACTGGTA ACGTGATGGA TGATTTGCAA
GTGCCGGATG TAGGTACGTT CAACGCCACT TTCATCAACT CGGGCATTCC AACCATTTTT
GTCGATGCCG AAGCGCTCGG CTATCAAGGT ACTGAGCTGC AAGATGCCAT CAACAGTGAT
CCACAAGCCT TGGCGAAGTT TGAAACGCTG CGCGCTTATG GCGCACTGAA AATGGGTCTG
ATTGAGCGCA TCGAAGAGGC ACAAAACCGC CAACATACGC CAAAAATTGC TTTTGTCAGT
GGCGCGAAAA GTTACCTCGC TTCAAGCGGT AAGCCAGTAG AAGCGGATTC GGTGGATCTG
CTCGTGCGTG CGCTCTCGAT GGGCAAACTG CATCACGCCA TGATGGGAAC CGCCGCTGTG
GCGATTGCCT CTGCTGCCGC CGTTCCGGGC ACGTTGGTCA ATTTGGCTGC CGGGGGCGGC
GAGCGTACGT CAGTCACCTT TGGTCATCCC TCCGGCACGT TAAAAGTCGG AGCGAAAGCC
AAGCAAGGTG AACAAGGCTG GCAAATTGAG CGCGCGATCA TGAGCCGCAG CGCCAGAATT
CTAATGGAAG GATGGGTACG CGTTCCCGAA AATTACGCTG CCCTCAGTGA GAGCAAGGAG
TAA
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| Protein sequence | MNETVSQIRI PATYMRGGTS KGVFFRLNDL PLEAQLPGAA RDALLLRVIG SPDPYGKQID
GMGGATSSTS KTVIVSASSR EDHDVDYLFG QVAIDKPFVD WSGNCGNLSA AVGPFAIHAG
LIPAERIPHN GVVAVKVWQV NISKTIVVHV PIVNGAVQEC GEFELDGVTF PAAEVQVDFV
DPADDSGAMF PTGNVMDDLQ VPDVGTFNAT FINSGIPTIF VDAEALGYQG TELQDAINSD
PQALAKFETL RAYGALKMGL IERIEEAQNR QHTPKIAFVS GAKSYLASSG KPVEADSVDL
LVRALSMGKL HHAMMGTAAV AIASAAAVPG TLVNLAAGGG ERTSVTFGHP SGTLKVGAKA
KQGEQGWQIE RAIMSRSARI LMEGWVRVPE NYAALSESKE
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