Gene VC0395_A0951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0951 
Symbol 
ID5136225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp977474 
End bp978181 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content50% 
IMG OID640532409 
ProductGntR family transcriptional regulator 
Protein accessionYP_001216897 
Protein GI147674607 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATGAAAA GTAGTCCGTT AGTCCGCCAA GCGAGCACTG AAAAAGAGAG CACCAAATCA 
GAGAATCTGA CCGAATATCT GATTGAAGCC ATTGTTGAAG GGGAGCTCGC GCCGGGCAGT 
AAAATCTCTG AACCTGAGCT CGCCAAACAG TTTCAAGTCA GCCGTGGCCC ATTGCGTGAA 
GCGTTAATGC GAGTCGAAGG GCTTGGCTTG ATAGAGCGCA TTCCGCACAT CGGTGCGCGA 
GTGATTCAAT TGTCACCCAC CAAATTGGTT GAGCTGTATG CAGTGCGCGA AGCTCTGGAA 
GGCATGGCTG CAAGGCTTGC GGCGCGCAAT ATTACCGAAA TCGAACTGGC GGGCTTAGAA 
AGCCTATTGT CGACACATTC GACCCATATC GATCAGGTTG AAGGCGCTTC TTACTTTCAC 
CAGCAGGGTG ATTTCGATTT CCACTACCGC ATTATTCAAG CCAGCCGCAA TCAACAACTG 
ATTGGCTTGC TGTGTGATGA GCTTTACCAC TTGCTGCGCA TGTATCGTTA CCAATCGCCG 
CGTTCGCATT CGCGTCCGGT AGAAGCTTTG GAAGAACACA AATTTATTCT GCGTGCGATC 
CGCCAACGAG ATGAAGAGTT GGCCGAAATG CTGATGCGTC GCCACATCTC GCGCAGTCGC 
CAATTGATCG AACAACAAAT AATGCTGGAT GCCCAACAAC AAGGTTAA
 
Protein sequence
MMKSSPLVRQ ASTEKESTKS ENLTEYLIEA IVEGELAPGS KISEPELAKQ FQVSRGPLRE 
ALMRVEGLGL IERIPHIGAR VIQLSPTKLV ELYAVREALE GMAARLAARN ITEIELAGLE 
SLLSTHSTHI DQVEGASYFH QQGDFDFHYR IIQASRNQQL IGLLCDELYH LLRMYRYQSP 
RSHSRPVEAL EEHKFILRAI RQRDEELAEM LMRRHISRSR QLIEQQIMLD AQQQG