Gene VC0395_A0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0945 
SymbolmglC 
ID5136420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp970226 
End bp971239 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content48% 
IMG OID640532403 
Productbeta-methylgalactoside transporter inner membrane component 
Protein accessionYP_001216891 
Protein GI147675406 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4211] ABC-type glucose/galactose transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATGG ATGCTGTCAA ATCATTTGCA ATTAAACATT TAAAAGAGGG CGCAATCTAC 
GCAGTGCTGT TTATTCTGCT GGCGATTATT GTGATTCAAG AGCCCTCATT TCTAAGCTTA
CGTAACCTCA GTAATATCCT GACTCAATCC TCGGTGCGCG TGATTATTGC GTTGGGGGTA
GCAGGTTTGA TTGTGACTCA AGGCACTGAC TTATCAGCTG GTCGCCAAGT GGGTCTCGCC
GCGGTGATTT CCGCTACTTT GTTGCAATCA ATGGATAACG TGAACAAAGT ATTCCCAAGC
TTGGGTGAAA TTCCGATTCT TGCGGTCATC ATTAGTGTCT GCTTGATTGG TGCGATTATC
GGTTTGGTCA ACGGTGTGAT CGTCGCTTAC CTCAAAGTAA CGCCGTTTAT CGCGACCTTA
GGCACCATGA TCATCGTCTA CGGCATTAAC TCGCTGTACT ACGACTCGGT CGGTGCATCA
CCGATTGCGG GTTTTGATGA ACGCTTCACT ACCTTCACTC AAGGCTTTAT CCGAATTGGG
GATTTTCGGT TCTCCTACAT CACCTTCTAC GCCATTATCG CGATCATTTT TATGTGGGTA
CTGTGGAATA AAACCGTGTT CGGCAAAAAC ATTTTTGCGG TTGGTGGAAA CCCAGAAGCG
GCGAAAGTGT CGGGTGTTAA CGTGCCTTTG ACTCTGCTTA AAGTGTATGC GCTTTCCGGT
GTGTTCTATG CGTTTGGCGG TATGCTCGAA GCGGGACGAA TTGGTAGTGC TACCAACAAC
TTAGGCTTCT TATATGAGTT GGATGCGATT GCGGCGTGTG TGGTGGGCGG TGTCTCATTC
GCTGGCGGGG TGGGGAGTAT CGCTGGGGTC GTAACCGGGG TACTGATCTT CACAGTAATC
AACTACGGTA TGACCTACAT CGGCGTTAGC CCATACTGGC AGTACATCAT TAAAGGCTCG
ATCATCATCT TCGCTGTAGC GCTGGATTCA ATGAAATACG CCAATAAGAA GTAA
 
Protein sequence
MTMDAVKSFA IKHLKEGAIY AVLFILLAII VIQEPSFLSL RNLSNILTQS SVRVIIALGV 
AGLIVTQGTD LSAGRQVGLA AVISATLLQS MDNVNKVFPS LGEIPILAVI ISVCLIGAII
GLVNGVIVAY LKVTPFIATL GTMIIVYGIN SLYYDSVGAS PIAGFDERFT TFTQGFIRIG
DFRFSYITFY AIIAIIFMWV LWNKTVFGKN IFAVGGNPEA AKVSGVNVPL TLLKVYALSG
VFYAFGGMLE AGRIGSATNN LGFLYELDAI AACVVGGVSF AGGVGSIAGV VTGVLIFTVI
NYGMTYIGVS PYWQYIIKGS IIIFAVALDS MKYANKK