Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0937 |
Symbol | |
ID | 5135946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 960778 |
End bp | 962100 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640532395 |
Product | sensor histidine kinase |
Protein accession | YP_001216883 |
Protein GI | 147674098 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000147175 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGCA TTTACATCGA GTCACTTGTC TCACTGATCG TGCTGTTTTT TGGCAGCTTG GTCAGCTATA GCTTTATTGT CTATGAATTA GATACCGACT ATGACTACGT ACTGGAAGAT TATCAGGCAG AAGCCTTACA GACTTTATTA AGTCAAATTC GTCAGTTAGA CAGTCCAGAA TCGGCGAAAA CCGCACTGCG TGGCTATGCC GAACATATCC ACAAAACTGT CGACTTACTA CCACTCACCG AATTACCACC AGAAGTACAA CAGCACTTTT CGAGTGAGGC AGCGCATTCT CCTATTTTCC ACGATGATGA CCGTAATTTA TGGCTTCAGT TGGACTCCAA CGAGCAAATT TATCTCCTCA AACCCGACAG CCACTCTCCT GTCTATCAAG CCATAGATCG CGCCGATAAC CTATTGTTTG TCTTTATGTT AGGTGGATTT GCTCTCTATT GTATGTTCTT AATTTGGTTT TTGAGTCGCC GGCTACGTGA GTTGGAGCGG GTCACTCACG ATTTCGCAAA TGGTAATTTG CAAGCGCGAG CGAGTACTAA AAGCAGTAAA AGCGTGGGTA AGCTCAACCA TAGCTTTAAC ATGATGGCCG ATAAAATCTC TCACCTGATC CTCAGTAACA AAGCGCTCAC CAACGCCATC GCACATGATT TACGCACCCC GATCTTCCGT ATCCAGTGGC AAGCTGAAGT GTTAGCCGAA AGCCAGTTGA ATGCAAAACA GCAACAGCAA GTTGCGAGCA TTATTGAGGA CACGGAGGAA ATGGAAACCA TGGTGGATGA ACTGCTGTAT TACGCCAAAC TAGAACATCC AGAAAGCGAC ATCCAGAGTC AGTATTTAGA AGTTAATCAG TGGCTTGCCG ACTTTATTGA CGAGCAAAGC CATAAAAGCA GTTTACAAAT ACAATACCTC CCTTCTCTGC AACCCTTAAT GCTGGATGCC GACCCTCAAT TGCTCACAAG GGCATTGGTT AACCTCATCC GTAATGCAGA AAAGTACGCA GGTGATCGTC TACTGATTGA AGCGAGTACC GTCGACGCTA AGCTCTGCAT CGCCATACAC GACAATGGAC CGGGGATTGA AGAGCAACAT TGGCCGCATA TCTTCGATGC CTTTTACAGC ACTGACTCGT CACGCAACAA AGCGCAGTCA GGGTTTGGGC TTGGTCTTGC CATCGTTAAG CAGATCATGG CGCGTCACCA AGGTGAAGTC ACGCTGACCA AGAGTCCATT GGGCGGAGCT TGTTTCTCGC TATGGCTACC TCTATACCCC AACAAACTGG AGTTGCCAGT AAACAAGCAG TGA
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Protein sequence | MRRIYIESLV SLIVLFFGSL VSYSFIVYEL DTDYDYVLED YQAEALQTLL SQIRQLDSPE SAKTALRGYA EHIHKTVDLL PLTELPPEVQ QHFSSEAAHS PIFHDDDRNL WLQLDSNEQI YLLKPDSHSP VYQAIDRADN LLFVFMLGGF ALYCMFLIWF LSRRLRELER VTHDFANGNL QARASTKSSK SVGKLNHSFN MMADKISHLI LSNKALTNAI AHDLRTPIFR IQWQAEVLAE SQLNAKQQQQ VASIIEDTEE METMVDELLY YAKLEHPESD IQSQYLEVNQ WLADFIDEQS HKSSLQIQYL PSLQPLMLDA DPQLLTRALV NLIRNAEKYA GDRLLIEAST VDAKLCIAIH DNGPGIEEQH WPHIFDAFYS TDSSRNKAQS GFGLGLAIVK QIMARHQGEV TLTKSPLGGA CFSLWLPLYP NKLELPVNKQ
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