Gene VC0395_A0937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0937 
Symbol 
ID5135946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp960778 
End bp962100 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content47% 
IMG OID640532395 
Productsensor histidine kinase 
Protein accessionYP_001216883 
Protein GI147674098 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000147175 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGCA TTTACATCGA GTCACTTGTC TCACTGATCG TGCTGTTTTT TGGCAGCTTG 
GTCAGCTATA GCTTTATTGT CTATGAATTA GATACCGACT ATGACTACGT ACTGGAAGAT
TATCAGGCAG AAGCCTTACA GACTTTATTA AGTCAAATTC GTCAGTTAGA CAGTCCAGAA
TCGGCGAAAA CCGCACTGCG TGGCTATGCC GAACATATCC ACAAAACTGT CGACTTACTA
CCACTCACCG AATTACCACC AGAAGTACAA CAGCACTTTT CGAGTGAGGC AGCGCATTCT
CCTATTTTCC ACGATGATGA CCGTAATTTA TGGCTTCAGT TGGACTCCAA CGAGCAAATT
TATCTCCTCA AACCCGACAG CCACTCTCCT GTCTATCAAG CCATAGATCG CGCCGATAAC
CTATTGTTTG TCTTTATGTT AGGTGGATTT GCTCTCTATT GTATGTTCTT AATTTGGTTT
TTGAGTCGCC GGCTACGTGA GTTGGAGCGG GTCACTCACG ATTTCGCAAA TGGTAATTTG
CAAGCGCGAG CGAGTACTAA AAGCAGTAAA AGCGTGGGTA AGCTCAACCA TAGCTTTAAC
ATGATGGCCG ATAAAATCTC TCACCTGATC CTCAGTAACA AAGCGCTCAC CAACGCCATC
GCACATGATT TACGCACCCC GATCTTCCGT ATCCAGTGGC AAGCTGAAGT GTTAGCCGAA
AGCCAGTTGA ATGCAAAACA GCAACAGCAA GTTGCGAGCA TTATTGAGGA CACGGAGGAA
ATGGAAACCA TGGTGGATGA ACTGCTGTAT TACGCCAAAC TAGAACATCC AGAAAGCGAC
ATCCAGAGTC AGTATTTAGA AGTTAATCAG TGGCTTGCCG ACTTTATTGA CGAGCAAAGC
CATAAAAGCA GTTTACAAAT ACAATACCTC CCTTCTCTGC AACCCTTAAT GCTGGATGCC
GACCCTCAAT TGCTCACAAG GGCATTGGTT AACCTCATCC GTAATGCAGA AAAGTACGCA
GGTGATCGTC TACTGATTGA AGCGAGTACC GTCGACGCTA AGCTCTGCAT CGCCATACAC
GACAATGGAC CGGGGATTGA AGAGCAACAT TGGCCGCATA TCTTCGATGC CTTTTACAGC
ACTGACTCGT CACGCAACAA AGCGCAGTCA GGGTTTGGGC TTGGTCTTGC CATCGTTAAG
CAGATCATGG CGCGTCACCA AGGTGAAGTC ACGCTGACCA AGAGTCCATT GGGCGGAGCT
TGTTTCTCGC TATGGCTACC TCTATACCCC AACAAACTGG AGTTGCCAGT AAACAAGCAG
TGA
 
Protein sequence
MRRIYIESLV SLIVLFFGSL VSYSFIVYEL DTDYDYVLED YQAEALQTLL SQIRQLDSPE 
SAKTALRGYA EHIHKTVDLL PLTELPPEVQ QHFSSEAAHS PIFHDDDRNL WLQLDSNEQI
YLLKPDSHSP VYQAIDRADN LLFVFMLGGF ALYCMFLIWF LSRRLRELER VTHDFANGNL
QARASTKSSK SVGKLNHSFN MMADKISHLI LSNKALTNAI AHDLRTPIFR IQWQAEVLAE
SQLNAKQQQQ VASIIEDTEE METMVDELLY YAKLEHPESD IQSQYLEVNQ WLADFIDEQS
HKSSLQIQYL PSLQPLMLDA DPQLLTRALV NLIRNAEKYA GDRLLIEAST VDAKLCIAIH
DNGPGIEEQH WPHIFDAFYS TDSSRNKAQS GFGLGLAIVK QIMARHQGEV TLTKSPLGGA
CFSLWLPLYP NKLELPVNKQ