| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0927 |
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| Symbol | rimJ |
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| ID | 5137533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 949969 |
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| End bp | 950544 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532385 |
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| Product | ribosomal-protein-alanine acetyltransferase |
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| Protein accession | YP_001216873 |
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| Protein GI | 147674891 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGGAT TAAACAGCGA ATGCCATTTC TATCAAACCG ATGGTGACAT TGTTGTACGC
TGCGCGCAAA TCAACGACGC CGAGCGTTTA AGCCAGTATT TTGTGGATAA CCGAAGCCAC
TTGATTGAGT GGGAGCCAAG GCGTGAAGCT GAGTTTTTTA CTGAGTCCGG CTGGCTGCAA
AGGCTAATTA AGCTCAATGA ATTGCACAAA ATGAAGCTCG GTTACTATCT ACTGATTTTG
GATGCGCAAA ATGATGCCAT GTTAGGCACC ATCTCATTTA GCAATATTAT CCGCTTCCCA
TTCCATGCGT GTAATGTCGG TTACTCGCTG GCCTATGAGG CGCAAGGCAA AGGGATCATG
ACGCGTGCTT TGACGATGGC TTGTCAGTAC ATGTTTAGCG AGCACAACAT GCATCGCATA
ATGGCTTCTT ACATTCCGCA CAATAAACGC AGTGAAAATG TGCTCAAACG CGTGGGTTTC
GTGCTTGAGG GCCATGCTAA AGATTACTTA CTGATCAACG GTAAATGGGA AGACCATAAC
CTGACTTCGC TGATCAATCC CAATTGGAAA GAATAA
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| Protein sequence | MNGLNSECHF YQTDGDIVVR CAQINDAERL SQYFVDNRSH LIEWEPRREA EFFTESGWLQ
RLIKLNELHK MKLGYYLLIL DAQNDAMLGT ISFSNIIRFP FHACNVGYSL AYEAQGKGIM
TRALTMACQY MFSEHNMHRI MASYIPHNKR SENVLKRVGF VLEGHAKDYL LINGKWEDHN
LTSLINPNWK E
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