| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0925 |
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| Symbol | |
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| ID | 5137390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 947295 |
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| End bp | 948314 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532383 |
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| Product | hypothetical protein |
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| Protein accession | YP_001216871 |
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| Protein GI | 147673702 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3768] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01620] conserved hypothetical protein, TIGR01620 |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATC TTAAAACCAA ACAGATTTTT AGCGAGCCAC TGCAAGGTAG TTTAGAAACG
CCGAGCTTGA CGGCTCAGCA GCAGTTTAGC GCACAAGAAA AGTTTGTGCC CATGAACATG
GAAGAGCCAG CAGAAGAGGC ATTGGAAGCT GAGCTTGACA CCGTCATTCG ACCCAGCAAA
GGGCGCAAAT GGTTTGCCGG TGGCTTGTTT GCGGCTTTCA GTGGTTTGGT CGCATGGCAG
GCTATCGATA GCGTGGTACA AGCCATTCAA CATTCGGACT GGCTCAGCCT AGGATGGGTG
GGGTTTATCA GTGCTTTGGC GACGTTAGGG TTGGGCGCTA TCGCGAAAGA GTTGTGGAAA
CTGCGTCGTC TACGTCAGCA TTTTAGTGTT CAAGAACAAG CGCAAATCTT GATGGAGAAT
GATGCAGTTG GCCAAGGCCA AGTGTTCTGT GAGCAGATAG CCAAACAAGG TAAAGTGGAT
AAGCAGGGCT ACCAACGTTG GCTATCGGCT CTCAATAGTA GCCACAGTGA TGCAGAAATT
CTCGATTTGT ATGATGCGTT GGTGGTGGCC GAACAAGACA AACAAGCCAG CCAAATTGTG
ACTCGTTATG CGACTGAAGC GGCCGCATTA GTGGCGATTA GCCCGCTCGC GATTGCTGAT
ATGTTGCTGG TGGCTTGGCG TAACTTTTCC ATGGTGGATC AACTGGCAAA AGTGTATGGC
GTTGAACTCG GTTACTGGTC ACGCATAAAA CTGTTTAAAG CCGTATTGCT CAATATGGCG
TTAGCTGGAG TCAGTGAATT GGCTGTTGAT GCCAGCGTGG ATCTGTTTTC CATGGACTTG
GCCGGACGCC TTTCTGCCCG TGCAGGGCAG GGGGTAGGCG TAGGTATTCT GACCGCACGT
TTGGGCATTA AAGCGGTAGG GTTGCTGCGT CCACTGCCAT GGCACCCCGA TCGTCAACTC
AAACTGAGTG CGGTTCGTAA GCAAGTCGTG AGTAAAGTGG CTGCTTTGCT CGCCAAATAA
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| Protein sequence | MSDLKTKQIF SEPLQGSLET PSLTAQQQFS AQEKFVPMNM EEPAEEALEA ELDTVIRPSK
GRKWFAGGLF AAFSGLVAWQ AIDSVVQAIQ HSDWLSLGWV GFISALATLG LGAIAKELWK
LRRLRQHFSV QEQAQILMEN DAVGQGQVFC EQIAKQGKVD KQGYQRWLSA LNSSHSDAEI
LDLYDALVVA EQDKQASQIV TRYATEAAAL VAISPLAIAD MLLVAWRNFS MVDQLAKVYG
VELGYWSRIK LFKAVLLNMA LAGVSELAVD ASVDLFSMDL AGRLSARAGQ GVGVGILTAR
LGIKAVGLLR PLPWHPDRQL KLSAVRKQVV SKVAALLAK
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