| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0914 |
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| Symbol | thiD |
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| ID | 5136929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 933533 |
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| End bp | 934381 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532372 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001216860 |
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| Protein GI | 147675443 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0556569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACAA TCTCTTCTAT TCATACTCCC ATAGTGCTGA CTATCGCAGG CTCAGATAGC
GGTGGTGGCG CTGGAATTCA AGCCGATATC AAAGCCATTT CAGCGACAGG GGGTTACGCC
TGCTCAGTGA TTACCGCGAT TACTGCACAA AATACGCAGG GTGTTTCCGC CGTTTTTCCT
TTGCCATTAG CAGTGGTTGA GCAACAGTTA GACGCCGTGT TTAGCGATAT TCCCGTCTTG
GCAGTCAAAA TTGGTATGCT GGCGGATGCC CCAATCATCG CTCTGGTTGC TAAGAAACTA
CGCCAATATC AACCAAAATG GATTGTGCTC GACCCAGTGA TGATCTCAAC CAGTGGCCAT
CATTTATTGG CGGCAGAGGC AGTCGAGACG TTAAAACGTG AGCTATTACC GTTAGCCAAT
CTCATTACGC CTAATCTGCC AGAAGCGGCG GTTTTAGTGG GGATGACGCA ACAAGAATGG
CAGCAGAATC CGCAGCAGGG TGTTACCGCG CTTAGTCAGT TAAACACACC AGCGGTACTG
CTCAAAGGCG GTCACGACCA TCAGCAAGCC AACAGTGATG ACTTACTGAT TCAAAGTGGT
GATAGTCGTT ATTTCTGTGC GCCCCGTATT GCTACGAAGA ATACGCATGG CACGGGCTGC
TCACTCTCAT CTGCGATTGC TTCATACTTA GCGCAGGGGG CTGAGTTAGT GGAAGCGGTG
GATAAAGCCA AACAGTATAT CCACCAAGCT ATTGTGCATG CCGATCAATT GAGGATCGGC
CGAGGTTATG GGCCGATACA CCATTTTTAT CTACTGCAAA TGGCTAAAAG CCAACAGAAA
AGCCAATAA
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| Protein sequence | MSTISSIHTP IVLTIAGSDS GGGAGIQADI KAISATGGYA CSVITAITAQ NTQGVSAVFP
LPLAVVEQQL DAVFSDIPVL AVKIGMLADA PIIALVAKKL RQYQPKWIVL DPVMISTSGH
HLLAAEAVET LKRELLPLAN LITPNLPEAA VLVGMTQQEW QQNPQQGVTA LSQLNTPAVL
LKGGHDHQQA NSDDLLIQSG DSRYFCAPRI ATKNTHGTGC SLSSAIASYL AQGAELVEAV
DKAKQYIHQA IVHADQLRIG RGYGPIHHFY LLQMAKSQQK SQ
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