| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0910 |
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| Symbol | |
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| ID | 5137880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 927799 |
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| End bp | 929712 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532368 |
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| Product | hypothetical protein |
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| Protein accession | YP_001216856 |
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| Protein GI | 147674424 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.529281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTAA CGATAGGAGC CTCCATGGAC GCCGAGTTAA TCGAGATTCA ACAATTCCTG
CAACAGCATC CGCCTTTTGA TGCCTTACCC AACGAACGAC TGCCTGAAAT CGCTCAACAA
ATTGAAATTG CCTACTTTCG TAAAGACACA CCGATTATTG GCTATAAACA AGCCATCAGT
GATTTATATT TGGTTCGTAG TGGGGCGGTC GAAGTCTATC GACGTCATGG TGAGCTGTAC
AATCGACTGA CGGAAGGCAG TCTATTTGGA CAAATGGGGT TATTAACGCG TAACCAAGTG
TCTTTTGCGG TCACTGCAAT TGAAGATACG CTGCTGTACT GTTTGCCTGA AGCGCTCTTT
CACCGTTTAC ACCAAGAGTT TGATAGTTTT GCCGATTTTG TTGAAGTAGA GCAAGCCGTA
CGCTTGCGTC AAACCGTTGC TAAACAAAAA GAACAAAATG ATCTTATCAC CAGCAAAGTC
AAACAGCTGT TAACCCGTTC AGCACCAACG ATAGACAAAC AAGCCTCTAT TCAACAGGCG
GCACAGCGCA TGGCAGATGA AAATGTCTCT GCGCTGCTGA TCCTCGATAA CCAGATCCTG
CTTGATACGG AAGATGACTC AACGCCCATG GTCGGCATTG TCACGGAACG AGACCTCTGC
CGACGCGTCT TGGCGCAAGG TATGGATGTC ACACAGACCG TCAGCCAAGT CATGACTCAT
GAGGTCATCT CGCTGGATCA TAACGCTTAC GTCTATGAAG CCATGCTCGC CATGCTACGC
AATAACGTTC ACCACCTCCC TGTATTAAGA GAAAGGCAGC CGATTGGTAT CATCGACATG
ACCGACATCG TACGCCATGA GTCGCAAAAC TCATTGCTTT TAGTCAGTCG TATCTACCAG
CAAACTTGTA TTGATGATTT GGCTCAACTC GCCAATGAAG TCAAAGCAAG CTTCGTACGT
TTAGTTAACG AAGACGCCAA TTCACACATG ATTGGTACTG CGATGTCGAC CATTGGCCGC
GCTTTCACGC AGCGCATCAT TGAATTAGTC GAGGCCGAGT TGGGTGCTGC GCCACTACCC
TACTGTTTTG TCGCCTTTGG TTCGATGGGA CGCGATGAAC TGTTGATTGT GACCGATCAA
GATAATGCTC TGATTTTAGA TGATCGCTAC GATGTGCAGC AGCATGGTGC TTATTTTGCT
CAATTTGCTG AGTTGGTGTG TAGGGGATTA GACCGCTGCG GATACCCATT GTGTGATGGT
GAGATCATGG CTAGCAATCC GAAATGGCGC ATGACTCGCA AAGAATGGGA AACCTGCTTT
GCTGACTGGA TTGATAATCC CAACCCGCAA GCTCTGCTCA ATGCGTCGAT TTTTTTTGAT
CTCGATGGTG TCTATGGCCG CACCAAATGG GCCGAGCAAC TGTCTGGTTT TATCGTACGC
CGCGCCAGAC GCAATCAGCG ATTTTTAGCC TGTTTGGCGC GTAATGCGCT CAATCGCACG
CCGCCACTGG GCTTTTTTAA GAATTTCGTG ATGGAAAAAG ATGGACGCCA TAACAACTCC
ATCAATTTGA AACGTCGCGG GACAGCACCA CTGGCAGATT TGATCCGCGT ACATGCCCTC
GCCGCAGGTT CACGCGCTAA AAACTCGTTT GAACGTTTAG ATGATGTAAT TGAAGCAGGA
TTGCTCCCAC AAGGTAAAGG CAAAGATCTG CGTGATGCCT TGGAATTCAT CGCTATGGTG
CGGATTCGCC ATCAAGCGAT TGATGTTGAA CAAGAGCGTG AGGCCGACAA CAGTATCGAG
CCGGAACATC TTTCGGACTT TGAACGACGC AACTTAAAAG ATGCGTTTCA GATCCTCAGT
AACGGACAGA ATTATCTTAA GTATCGTTAC CAAGCCAACC AACATTTTAA GTGA
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| Protein sequence | MFVTIGASMD AELIEIQQFL QQHPPFDALP NERLPEIAQQ IEIAYFRKDT PIIGYKQAIS
DLYLVRSGAV EVYRRHGELY NRLTEGSLFG QMGLLTRNQV SFAVTAIEDT LLYCLPEALF
HRLHQEFDSF ADFVEVEQAV RLRQTVAKQK EQNDLITSKV KQLLTRSAPT IDKQASIQQA
AQRMADENVS ALLILDNQIL LDTEDDSTPM VGIVTERDLC RRVLAQGMDV TQTVSQVMTH
EVISLDHNAY VYEAMLAMLR NNVHHLPVLR ERQPIGIIDM TDIVRHESQN SLLLVSRIYQ
QTCIDDLAQL ANEVKASFVR LVNEDANSHM IGTAMSTIGR AFTQRIIELV EAELGAAPLP
YCFVAFGSMG RDELLIVTDQ DNALILDDRY DVQQHGAYFA QFAELVCRGL DRCGYPLCDG
EIMASNPKWR MTRKEWETCF ADWIDNPNPQ ALLNASIFFD LDGVYGRTKW AEQLSGFIVR
RARRNQRFLA CLARNALNRT PPLGFFKNFV MEKDGRHNNS INLKRRGTAP LADLIRVHAL
AAGSRAKNSF ERLDDVIEAG LLPQGKGKDL RDALEFIAMV RIRHQAIDVE QEREADNSIE
PEHLSDFERR NLKDAFQILS NGQNYLKYRY QANQHFK
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