Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0905 |
Symbol | |
ID | 5137377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 919676 |
End bp | 920698 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640532363 |
Product | LacI family transcription regulator |
Protein accession | YP_001216851 |
Protein GI | 147674834 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.153001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGAA TTAAAGATGT TGCTGAACTT GCAGGTGTGA ACCGCTCTAC CGTATCGAGG ATCATCAATG GTGAGGGGAA ATTTAAAGAG GAAACGCGGC GTAAGGTTGA GCAAGCAATG GCTCAACTTA ATTATCGACC GAGTGCAATA GCCCGTTCTT TGGCGACCTC CTCATCGAAT ATGATGGGTC TTCTAGTCAC GTATTACACA GGTGGCTTTT TTGGTGAAAT GATGGAACAG GTGCAAACCG AGTTGGATAT GCACCATAAG TTTTTGATCA CAGCACAAGG CCATCACTCT GCACAAGGAG AGAGAGAGGC GATACAGCGC TTTCACGATC TGCGTTGCGA TGGGTATGTT CTGCACAGCC GGTATTTATC AGACGATGAT TTGCGAGCAT TAGCTCAGCA GCCGACTCCC TTTGTTCTTC TCGATCGTTA TGTGGCAGGT TTGGAAGAGC GCTGCATTAC TTTTGACCAT CGTGGAGCAA GCCAGATAGT GGTGGAGCAT CTCATTCAGC AAGGCCACAG GAAAATTGCT TGTATCACCG GACCGCTACA CAGACACAAT AGTCGTCTAC GGCAGCAAGG CTATCTCGAT GCCTTAGCTC AAGCGGGGAT TCTCCCGAGC AAGTCACTGT GTGAAGAAGG CAATTACGGT CGCAAAAGTG GTTATTTTGC GATGCAGCAG CTATTCGCTC GCCACCCCGA GATCACGGCT GTTTTCTCGT GTAGTGAGGA GATGACGACT GGGGCGCTGC AGTATTTACA TGAACAAGGT ATTGCGGTGC CGGGGCGGAT TTCTATCGTC AGTTTTGACA GTGTTGATTT GTGTGAGAGT CTATATCCAA CGGTGACGGC GGTACATTTC CCGATCAGCG AAATGGCACG TGCGGCGGTG CAGTCATTGA TTGCGATGGT GAAACAGCAA CCGACAGTCG GTCCGCAAAG CTTTCGTCCG ATCTTAAAAA AGCGTCACGC CGATCAACCA CTGTCGAAAA TAGCTGAAAG GCAAGACTCA TAA
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Protein sequence | MARIKDVAEL AGVNRSTVSR IINGEGKFKE ETRRKVEQAM AQLNYRPSAI ARSLATSSSN MMGLLVTYYT GGFFGEMMEQ VQTELDMHHK FLITAQGHHS AQGEREAIQR FHDLRCDGYV LHSRYLSDDD LRALAQQPTP FVLLDRYVAG LEERCITFDH RGASQIVVEH LIQQGHRKIA CITGPLHRHN SRLRQQGYLD ALAQAGILPS KSLCEEGNYG RKSGYFAMQQ LFARHPEITA VFSCSEEMTT GALQYLHEQG IAVPGRISIV SFDSVDLCES LYPTVTAVHF PISEMARAAV QSLIAMVKQQ PTVGPQSFRP ILKKRHADQP LSKIAERQDS
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