Gene VC0395_A0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0905 
Symbol 
ID5137377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp919676 
End bp920698 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content49% 
IMG OID640532363 
ProductLacI family transcription regulator 
Protein accessionYP_001216851 
Protein GI147674834 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.153001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAA TTAAAGATGT TGCTGAACTT GCAGGTGTGA ACCGCTCTAC CGTATCGAGG 
ATCATCAATG GTGAGGGGAA ATTTAAAGAG GAAACGCGGC GTAAGGTTGA GCAAGCAATG
GCTCAACTTA ATTATCGACC GAGTGCAATA GCCCGTTCTT TGGCGACCTC CTCATCGAAT
ATGATGGGTC TTCTAGTCAC GTATTACACA GGTGGCTTTT TTGGTGAAAT GATGGAACAG
GTGCAAACCG AGTTGGATAT GCACCATAAG TTTTTGATCA CAGCACAAGG CCATCACTCT
GCACAAGGAG AGAGAGAGGC GATACAGCGC TTTCACGATC TGCGTTGCGA TGGGTATGTT
CTGCACAGCC GGTATTTATC AGACGATGAT TTGCGAGCAT TAGCTCAGCA GCCGACTCCC
TTTGTTCTTC TCGATCGTTA TGTGGCAGGT TTGGAAGAGC GCTGCATTAC TTTTGACCAT
CGTGGAGCAA GCCAGATAGT GGTGGAGCAT CTCATTCAGC AAGGCCACAG GAAAATTGCT
TGTATCACCG GACCGCTACA CAGACACAAT AGTCGTCTAC GGCAGCAAGG CTATCTCGAT
GCCTTAGCTC AAGCGGGGAT TCTCCCGAGC AAGTCACTGT GTGAAGAAGG CAATTACGGT
CGCAAAAGTG GTTATTTTGC GATGCAGCAG CTATTCGCTC GCCACCCCGA GATCACGGCT
GTTTTCTCGT GTAGTGAGGA GATGACGACT GGGGCGCTGC AGTATTTACA TGAACAAGGT
ATTGCGGTGC CGGGGCGGAT TTCTATCGTC AGTTTTGACA GTGTTGATTT GTGTGAGAGT
CTATATCCAA CGGTGACGGC GGTACATTTC CCGATCAGCG AAATGGCACG TGCGGCGGTG
CAGTCATTGA TTGCGATGGT GAAACAGCAA CCGACAGTCG GTCCGCAAAG CTTTCGTCCG
ATCTTAAAAA AGCGTCACGC CGATCAACCA CTGTCGAAAA TAGCTGAAAG GCAAGACTCA
TAA
 
Protein sequence
MARIKDVAEL AGVNRSTVSR IINGEGKFKE ETRRKVEQAM AQLNYRPSAI ARSLATSSSN 
MMGLLVTYYT GGFFGEMMEQ VQTELDMHHK FLITAQGHHS AQGEREAIQR FHDLRCDGYV
LHSRYLSDDD LRALAQQPTP FVLLDRYVAG LEERCITFDH RGASQIVVEH LIQQGHRKIA
CITGPLHRHN SRLRQQGYLD ALAQAGILPS KSLCEEGNYG RKSGYFAMQQ LFARHPEITA
VFSCSEEMTT GALQYLHEQG IAVPGRISIV SFDSVDLCES LYPTVTAVHF PISEMARAAV
QSLIAMVKQQ PTVGPQSFRP ILKKRHADQP LSKIAERQDS