Gene VC0395_A0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0897 
Symbol 
ID5136366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp911222 
End bp911701 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content50% 
IMG OID640532355 
ProductMarR family transcriptional regulator 
Protein accessionYP_001216843 
Protein GI147673978 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAAAC ACGAAGAAGT ATTAGTCGCA CTGCGCCAGA TCATCCGCGC CATTGACCTA 
CACTCCAAAA AACTTAATAA GGACGCAGGG CTCACCGGCC CCCAATTGAT TTTGATGCGT
TCAATTCATG ACTTAGGTGA ACAGGTCACC ATCCGTGAGC TCGCGGTGCA TACCAATATG
AGCCAAGGCA CGGCTACCAC GATTTTGGAT CGATTGGAGC GTAACGGCTA TGTACAGCGC
GTGCGCAGTA ACAGTGATAA ACGCAAAGTT CATGCACACT TAACCGATGA GGGGCGTAAG
CTGCTCGCAC AAGCACCACA GCCTTTACAA GAGAGCTTTG TTGAGCAATT CCATCAATTA
CAAGATTGGG AACAGAGCTT ACTGCTCTCT TCTGTACAAC GCATCTCTGC CATGATGAAC
GCGCAAGATA TGGATGCCGC GCCGATGCTG ACGATTGGTA GCATCACGCA GCCAGAATAG
 
Protein sequence
MEKHEEVLVA LRQIIRAIDL HSKKLNKDAG LTGPQLILMR SIHDLGEQVT IRELAVHTNM 
SQGTATTILD RLERNGYVQR VRSNSDKRKV HAHLTDEGRK LLAQAPQPLQ ESFVEQFHQL
QDWEQSLLLS SVQRISAMMN AQDMDAAPML TIGSITQPE